Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1736 |
Symbol | |
ID | 5206003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2147092 |
End bp | 2147973 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640599961 |
Product | hypothetical protein |
Protein accession | YP_001280626 |
Protein GI | 148653533 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000795767 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACAC TACCTCGTCC TCTTAACTTA GATTTTTCAC GCTTACCTGT GTCAAAGCTG ACCGGTAAGC CTGTCATTCA TTTTGCCCAT GCCAATGGTA TGCCAAGCCA AGTCTACCAG CCACTCTTTG AGCAGCTACA GGAGCATTTT ACGGTGGAGT ATATCCCAGT TCTGGGCTTT GATGAGTTGG GCGAGGTCAG TTATCCCATT GATAATCACT GGAAGAGCTT AACAGATCAA GTGATTGATA GTATTCAAAG CGTGGTCAAC AAGCACAAGG TGCCGGTGAT AGGGCTTGGC CATTCATTAG GGGCTTTGTG TACCCTACAG GCGATGTACC GTAAGCCTAA GCTATTTATG CAATCGGTAT TGATGGATCC ACCGCTTATT TATGGCCGTG ATAACTTGTT GTGGCATGCC GCTAAGCTAT TGTCAGCAAA AACCGTGGAT AAGATGTCAC CTGCCGGTAT CTCTAAGCAT CGCCGTGATG TGTGGGACAG TCGTGAGCAG GCGCGTCAGC TTTTGCGACC TAAGACTTTT TTTAAAAACT TCGATCCACG CACCTTTGAG GGCTACATTC AGCATGGCTT GCGCAGTCTA CCTGATGGTA CAGTGACCCT AACCATTCCA AAAGACGCTG AAGTAGCCGT GTTTCGTACG AATCCCTCTT GGTATTGGTT AAAACCCAAT AAACCACCCA AAAAGCCGGT GACTTTAATT ATCGGTGATG ACAGTCAGTT TTATAAACGC AGCTTTCCGC CCAAGATACG TAAGCGGCTG TCTATCCCCT TTAAGCTACA TGCTGGCGGG CACATGTTCC CGCTAGAGTA TCCTGACTCT GTGGTGTCGC TAATTTTGGC AACCATTGCT GAACAAGGCT AA
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Protein sequence | MSTLPRPLNL DFSRLPVSKL TGKPVIHFAH ANGMPSQVYQ PLFEQLQEHF TVEYIPVLGF DELGEVSYPI DNHWKSLTDQ VIDSIQSVVN KHKVPVIGLG HSLGALCTLQ AMYRKPKLFM QSVLMDPPLI YGRDNLLWHA AKLLSAKTVD KMSPAGISKH RRDVWDSREQ ARQLLRPKTF FKNFDPRTFE GYIQHGLRSL PDGTVTLTIP KDAEVAVFRT NPSWYWLKPN KPPKKPVTLI IGDDSQFYKR SFPPKIRKRL SIPFKLHAGG HMFPLEYPDS VVSLILATIA EQG
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