| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1734 |
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| Symbol | |
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| ID | 5206001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2145115 |
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| End bp | 2146161 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599959 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_001280624 |
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| Protein GI | 148653531 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00617531 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATA CTGCCTCAGC TGTCACCGCA GCGCTTCATT CTGCCGATCT CATGCACAAT
AAGCGACTCT CAGTTGCCCC TATGATCGAC TGGACTACGA CAGATTATCG TTTTTTTGCG
CGTCTGTTTA ATCCGCACAC TTACTTATAT ACTGAGATGA TTTCGACCAG TGCCATTTTA
CAAGGCAAAA CCGATCGCTT ACTGCGCTAT GACACACTTG AGCATCCACT GGTATTACAG
CTAGGCGGTG CCGATATTAG CGAGATGACC CAGTGTGCTG TTGAAGCCCA AAAGCGCGGC
TTTAATGAGG TTAATATTAA TGTGGGCTGT CCCTCTGATA GAGTCCAGCA CAACAAAATA
GGTGCCTGCT TGATGGCTGA GCCTGATACC GTAGCCGCCT TGGTGCGTAA TATGCAAGCG
CATGTTGATA TTCCAGTGAC TGTCAAGCAT CGCATTGGCA TAGATGAGCA TGACAGTTAT
GAGTTTATGC AAGACTTCGT GAGTGCCAGT GCTGAAGCCG GTTGTCAGCG TTTTATCGTT
CATGCCCGTA TCGCTTGGCT AAACGGACTA AGCCCTAAAG AAAACCGTGA GATTCCGCCA
CTGCGCTATG AGGATGTCTA CCGCTTAAAG CAAGCGTTTC CTGAGCTACA TATTGAAATT
AATGGCGGTA TTGATAGCAT TGAGCAGATC AAAGCCCATC TTCAGCAAGT CGACGGGGTC
ATGATTGGCC GTGCTGCCTA CCACAATCCC TATATCTTGG CCGAAGCAAT GTCGTTTTGG
GGCGAGGCTG CGCCTAGTCG CGCACAGATA TTAACCAAAT TGTACCCCTA CTTAGAGCAG
CAAGTGGCCA AGGGCGAGCC GCTACCTTCT TTGGCCCGTC ACTTCTTGGG GTTGTTCCAA
GGTCTGCCCG GTGCCCGCAA ATGGCGACAA GCATTAAGCG GTAAGCAGCA AATGAGTGTC
GATGATATTC GCCGAGCAGC TGATGCGACC CTAGCCATCA TTGAGCGTGC GTCTACTGAT
GATTTGCTTG ATAATTCGCT CAATTAA
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| Protein sequence | MTDTASAVTA ALHSADLMHN KRLSVAPMID WTTTDYRFFA RLFNPHTYLY TEMISTSAIL
QGKTDRLLRY DTLEHPLVLQ LGGADISEMT QCAVEAQKRG FNEVNINVGC PSDRVQHNKI
GACLMAEPDT VAALVRNMQA HVDIPVTVKH RIGIDEHDSY EFMQDFVSAS AEAGCQRFIV
HARIAWLNGL SPKENREIPP LRYEDVYRLK QAFPELHIEI NGGIDSIEQI KAHLQQVDGV
MIGRAAYHNP YILAEAMSFW GEAAPSRAQI LTKLYPYLEQ QVAKGEPLPS LARHFLGLFQ
GLPGARKWRQ ALSGKQQMSV DDIRRAADAT LAIIERASTD DLLDNSLN
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