| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1730 |
|---|
| Symbol | |
|---|
| ID | 5206203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2139142 |
|---|
| End bp | 2140446 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640599955 |
|---|
| Product | O-succinylhomoserine sulfhydrylase |
|---|
| Protein accession | YP_001280620 |
|---|
| Protein GI | 148653527 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000563319 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATA ATACTCTAAG CCTTGATCCC TCAAAAACTG CGCCTACCCC TAGTAAGTCA
GGCCCTCAGT TAGATAGTAA TTGGAACAAC GATGCGCTTG ATTTGAGCCA AGACTATGGC
ATGCAGACCA TAGCAGTCAG AGCCGGTCAA CATCGTACCG ATGAAGGTGA GCACAATGAG
CCAATTTTCA CCACCAGCTC TTATGTGTAT GAGTCAGCGG CTGATGCTGC CGCCCACTTT
AATGGTAGCA AAAGCGGTAA TGTCTATTCA CGCCACACCA ATCCCACAGT ACGTACCTTT
GAGCGTCGAT TGGCTGCACT AGAGGGTGGT GAGCGTGCGG TGGCCACAGC CTCTGGTATG
GGCGCAATCT TGACCATGTG CCTAGCTTAT CTTAAGCAAG GGGATCACAT TGTAGCAGCC
AAGCAGCTGT TTGGCTCAAC GGTCGGTCTG TTTAATAACT TTATGGGTAA GTTTGGTGTC
AGCGTCACCT ATGTGGACTG CTTTGACAAT CAAGCTTGGG CTGATGCCAT TGAGCCCAAT
ACCCGCCTGC TATTTTGTGA AACCCCAAGC AATCCTTTGG GTCAAATCGC CGACTTACAG
GCCATTAGTG AGATCGCTCA CGCTCAAGGC GCACTGTTTG TGGTTGATAA CTGTTTTGCG
ACCCCAGCCA TTCAAAAGCC CTTGGATTTT GGTGCCGATG TGGTGATTCA TTCAGCCACC
AAGTATATCG ATGGGCAAGG CCGCGTATTG GGCGGTGCTT TAGTGGGTAG CGATGAGCTA
ATGCAGCAGG CCTTCGTTGT GGTACGATCA GGCGGGATTA GCATGAGCCC GTTTAATGCT
TGGGTATTTA TCAAAGGTCT TGAAACCTTG AATTTGCGCA TGCAGGCACA TTGTGACAAT
GCCAATAAGA TTGCCGCCTT TTTGCAGTCG CATCCCCATG TAGAAAAAGT GCATTTTTCA
GGATTAACCA GTCATCCTAT GCATGAATTA GCGGTCAAGC AGCATCACCG CGCCAATTGC
TTTGGTGCCA TTATGGGCTT TGAGGTGAAG GCGGTAGGGG CACATACTGC TCAATCTGCC
GCGTGGCATG TTATTGATAG CACGCGCATG GTGTCTATTA CCAACAACTT GGGCGATGCC
AAAACCACAG TGACCCATCC GGCCACCACC ACCCACTTTA GGATTTCGGC TGAGGCAAGA
GCTGAGGCGG GCGTCACTGA CTCATTAATT CGACTGTCTG TGGGCCTTGA AGATGTCGAT
GATATTATCA AAGACTTAGC ACGCGGATTG GACAGTCTGA GCTAA
|
|---|
| Protein sequence | MTDNTLSLDP SKTAPTPSKS GPQLDSNWNN DALDLSQDYG MQTIAVRAGQ HRTDEGEHNE
PIFTTSSYVY ESAADAAAHF NGSKSGNVYS RHTNPTVRTF ERRLAALEGG ERAVATASGM
GAILTMCLAY LKQGDHIVAA KQLFGSTVGL FNNFMGKFGV SVTYVDCFDN QAWADAIEPN
TRLLFCETPS NPLGQIADLQ AISEIAHAQG ALFVVDNCFA TPAIQKPLDF GADVVIHSAT
KYIDGQGRVL GGALVGSDEL MQQAFVVVRS GGISMSPFNA WVFIKGLETL NLRMQAHCDN
ANKIAAFLQS HPHVEKVHFS GLTSHPMHEL AVKQHHRANC FGAIMGFEVK AVGAHTAQSA
AWHVIDSTRM VSITNNLGDA KTTVTHPATT THFRISAEAR AEAGVTDSLI RLSVGLEDVD
DIIKDLARGL DSLS
|
|---|
| |