Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1724 |
Symbol | |
ID | 5206197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2131718 |
End bp | 2132515 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640599949 |
Product | nitroreductase |
Protein accession | YP_001280614 |
Protein GI | 148653521 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0035876 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACG ACAACAGTCA CCAAGACAGT AACGCGAATG CTGCTAACCT TGAGACGGCG AATAATGAGC AGGCGCTCAG CCCAAAAGCC CCTTATCTAG AAGCTTTTAA AAACGTGGTG GAGTCGCGTC GCTCGGTAAG AAGATTTACT GACACGCCCA TTTCAGATGA CGTGCTACGT GACTGCTTGC GATTGGCCAT GCTCGCCCCG AACTCAAGCA ACTTACAGCC TTGGGAGTTT TATGTCATTA ACACGCCAAA GAAGCGTGCT AAGGCCAATC AAATTTGTAT GAACCAAAAC GGCGCCAGAA CCGCAAATCG ACTTATTGCT GTGGTGGCAA GAACCGACAC TTGGCGCGAC AACGCCAAAC AAAATATTCG CAAGTTCCCA GATGGCGCTG CGCCAAAAAA GGTGCGTGAT TATTACGAAA GAATTGTTCC ATTAGATTTT TTGCGTGGAC CAGCTGGCAT TATTTCGATT GCTAAGTGGG GCATGACAAA GGCCGTTCGT CAATTTAAAG GCCCGGTTAA ATCACCTTAT TATACCTATG AAGACATCAA AAACTGGGCG ATGTATAACA CGGCTCTTGC TGCAGAAAAC TTGATTTTAG CCTTACGTGC TCACGGCTTT GACAGCTGTG CTATGGGTGG CTTTGATGAG CCTGCCCTAA AAAAACTGCT CAAACTTGGC AATCACCATC ATGTGGTTAT GATGATTGGT GCCGGAGAGC GTGCTGATAA TGGTATATAC CACAGTCAGT TCCGTTTCGA TTACGATCAA TTCGTCAAAG AAGTTTAA
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Protein sequence | MNNDNSHQDS NANAANLETA NNEQALSPKA PYLEAFKNVV ESRRSVRRFT DTPISDDVLR DCLRLAMLAP NSSNLQPWEF YVINTPKKRA KANQICMNQN GARTANRLIA VVARTDTWRD NAKQNIRKFP DGAAPKKVRD YYERIVPLDF LRGPAGIISI AKWGMTKAVR QFKGPVKSPY YTYEDIKNWA MYNTALAAEN LILALRAHGF DSCAMGGFDE PALKKLLKLG NHHHVVMMIG AGERADNGIY HSQFRFDYDQ FVKEV
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