Gene PsycPRwf_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1709 
SymbolmetG 
ID5206834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2113541 
End bp2115634 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content45% 
IMG OID640599934 
Productmethionyl-tRNA synthetase 
Protein accessionYP_001280599 
Protein GI148653506 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCAAA TACTCGTAAC CAGTGCCCTG CCCTATGCCA ATGGCCCTAT TCACTTAGGA 
CATTTGGTGG AATACATTCA AACTGACATT TGGGTACGAG CGATGAAGGC TCAAAGCCAT
CAAGTCACCT ACGTTTGTGC CGATGACGCT CACGGCACCG CCATTATGCT AAAAGCTGAA
GCCAATGGGG TCACGCCAGA GCAGCAAATC GCCACTGTAA AAGCCTCTCA CGAAGCAGAT
TTTAGTAAAT TCTTAATTGG TTTTGACAAC TACCACTCTA CTCACTCTGA AGAAAACCGT
GAGCTATCTG AGTTAATTTA TCGCCGTCTA AATGGTGAAG GTCATATCTC AACCAAAGAT
GTTGAGCAAT TATTTGATCC AGAAAAAGGC TTATTTTTAG CCGACCGTTT CGTGAAAGGC
GAATGCCCAG AATGTGGGGC TCAAGACCAA TATGGTGATA ACTGTGAAGT GTGCGGCACC
ACTTACAATG CCACTGAACT TAAAAACCCG TATTCGACCT TATCGGGTGC AACCCCTGTA
TTAAGAACCT CAAAACACTA CTTCTTTAAC CTGCCTGAAT TTGAGAGCTT CTTAAAACAG
TGGACCAAAG ATGAGGGACG TTTACAGCCC TCAGTTTCTA ACAAGCTTCA GGAGTGGTTT
GAAGCCGGCC TTGCCAGCTG GGACATCTCA CGTGATGCGC CCTATTTCGG TTTCAAAATC
CCAGACACGC CAGAGGGTGA GCCGGATAAA TACTTTTATG TGTGGCTAGA TGCCCCTGTG
GGCTATATGG CCAGTTTTAA AAACCTATGC AAACAGCGTC AAGGCTCCAC TGATCCACAA
CAACCAGAAT TGAGCTTCGA TGATTATTGG TTACAAGAAA ATCAGCATAA AACTGAGCTG
TATCACTTCA TCGGCAAAGA CATTGTTTAT TTCCACGCTT TATTTTGGCC CGCCATGCTG
GCCGGCAGTG AATACCGTAC CCCAACGGGG GTGTTCGCTC ACGGCTTCTT AATGGTCAAT
GGCGATAAAA TGAGCAAATC TCGCGGCACC TTTATCCAAG CCGAAACCTT TGCCAAACAT
TTAAACCCTG AGTATCTACG TTACTATTTC GCCAGCAAAC TGTCTGAGAA AGTTGAAGAC
ATTAATCTAG ACTTTGCAGA TTTTATGCAA AAGGTGAACT CAGACATGGT CGGTAAAGTG
GTGAATATTG CCAGCCGTAG CGCCGGTTTT ATTGCCAAAA AATATGATGG CATGCTCTCA
GACAGCTGTG CTGAGCCTGA GTTATTAAAT GAGATTGTGC GCGCTGGTGA AGAGATTGCT
ACGGCTTATG AAAATCGTGA GTTTAGCCGT GCCATGCGCC TGATCATGCA GTGCGCAGAC
AAGGCTAACG AATATATCGA CAGCAAAAAG CCTTGGGCAA TGGCCAAAGA AGAAGGCCGT
GAACAAGAGG TTCAGGATGT ATGTACGGTT GCTATCAATA TTTTCCGTCA ATTGATGGTG
TATTTGGCGC CTGTGTTACC AGAGCTTACA GACAATGCCA AAGCCTTCTT AAATATTGAT
GACTTAAGCT TTGCCAGCCG CCATGAGTTA TTGCTAGGTC ATAAAATCAA TAAGTTTAAG
CCGTTAATGC AGCGTATTGA GCAGGCTCAA ATTGATGCTA TGGTGGCAGA CTCCAAACAA
GACTTGTTGG CAACACCAAC TGCTCAGGCC GATAACGTAG CTAAAGCAGC TCAAGCGTCA
GAAACTAATG ATCAGCAAGA CAGCGACTAC ATAGAGTTTG ATGACTTTAT GAAAGTTGAA
ATGACGGTGG CTCAAGTACT TGAATGTAAT CATGTTGAGG GTGCAGACAA GCTACTGCAG
TTCACATTAG ACATCGGCAA AGAGCAGCCC ATTAATGTCT TTAGTGGCAT TCGTAAATTC
TATGAACCTG AGCAACTGGC CAACAAAAAA GTGATTTGTG TCACTAATCT TGCCCCGCGC
AAAATGAAAT TTGGGGTGTC AGAAGGTATG ATCTTATCAT CAGGTGATCC AAAAACAGGA
CTGGTGGTCA TCACGCTACC TGACGAGTGT AAAGTGGGCG ATAAATTGGC TTAA
 
Protein sequence
MRQILVTSAL PYANGPIHLG HLVEYIQTDI WVRAMKAQSH QVTYVCADDA HGTAIMLKAE 
ANGVTPEQQI ATVKASHEAD FSKFLIGFDN YHSTHSEENR ELSELIYRRL NGEGHISTKD
VEQLFDPEKG LFLADRFVKG ECPECGAQDQ YGDNCEVCGT TYNATELKNP YSTLSGATPV
LRTSKHYFFN LPEFESFLKQ WTKDEGRLQP SVSNKLQEWF EAGLASWDIS RDAPYFGFKI
PDTPEGEPDK YFYVWLDAPV GYMASFKNLC KQRQGSTDPQ QPELSFDDYW LQENQHKTEL
YHFIGKDIVY FHALFWPAML AGSEYRTPTG VFAHGFLMVN GDKMSKSRGT FIQAETFAKH
LNPEYLRYYF ASKLSEKVED INLDFADFMQ KVNSDMVGKV VNIASRSAGF IAKKYDGMLS
DSCAEPELLN EIVRAGEEIA TAYENREFSR AMRLIMQCAD KANEYIDSKK PWAMAKEEGR
EQEVQDVCTV AINIFRQLMV YLAPVLPELT DNAKAFLNID DLSFASRHEL LLGHKINKFK
PLMQRIEQAQ IDAMVADSKQ DLLATPTAQA DNVAKAAQAS ETNDQQDSDY IEFDDFMKVE
MTVAQVLECN HVEGADKLLQ FTLDIGKEQP INVFSGIRKF YEPEQLANKK VICVTNLAPR
KMKFGVSEGM ILSSGDPKTG LVVITLPDEC KVGDKLA