| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1697 |
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| Symbol | |
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| ID | 5205755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2098754 |
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| End bp | 2100541 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599922 |
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| Product | bifunctional NADH:ubiquinone oxidoreductase subunit C/D |
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| Protein accession | YP_001280587 |
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| Protein GI | 148653494 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C
[TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.395952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAACGG ATAATAGCAA AGCGACTGAC AATAGCGCCA ATCCTAATAT GACACAGCAT
GCTGTGCTGC GTGAGCTTGG ACATAAGTTT GCAGGTAAAT TCACTGAGCA GTTCACCTTT
GATGGTATCC CTACCATTTG GGTATCGCGC CAGGATTTAC TTGACGTATT GATGTACCTA
CGCACCCTGC CCAAACCTTA TGTAATGTTG CTTGACTTAT CAGCAATGGA TGAGCGTTTG
CGTCAGCACC GTGACGGCTT ACCTGCCAGT GATTTTACAG TCTTTTATCA CTTGATGTCG
CTTGAGCGTA ACAGTGATAT TCGCGTAAAA GTGGCCTTGT CAGAAGACGA TCTAAAGGTT
CCAACAGCGA CCAAGATTTG GCCAAATGCT AACTGGTACG AGCGTGAAGT GTGGGACATG
TTCGGTATCG TCTTTGATGG CCATCCCCAT TTAACCCGTA TTTTATTACC CAAATACTGG
GAGGGTCATC CGCTTCGCAA AGAGTACCAT GCGCGCGCTA CTGAATTTAC CCCGTATTTC
CTAAACAATG CCAAGCAGCA GTTTGAGCAA GAAAACCTAC GCTTTGTTCC TGAAGAGTGG
GGGATGAAGC GCAGTGGCCG AGATGAGGAC TTTATGTTCT TAAACTTAGG CCCGAACCAC
CCCTCAGCGC ACGGTGCATT CAGATTGGTA TTACAGTTAG ATGGTGAAGA AGTCATCGAC
TGTATCCCAG ACATCGGCTA CCACCACCGC GGTGCAGAGA AGATGGCTGA GCGTCAAACT
TGGCACTCTT ATATCCCCTA TACCGACCGT ATTGACTATC TTGGCGGCGT CATGAATGAG
CTGCCTTATG TCATGGCAGT TGAGCAGTTG GCGGGCATCA CAGTCCCTGA ACGTGCTCAG
ACCATTCGCG TCATGATGAG TGAATTCTTC CGTATTACCA ATAATTTATT GTATTTCGGT
ACCTTTATTC AGGATGCTGG GGGTATGACG CCAGTATTTT ATATGTTTAC TGACCGTCAA
AAAGCCTATG ATGTGATTGA AGCGGTTACC GGCTACCGCA TGCACCCAGC TTGGTTCCGT
ATCGGCGGTA CTGCAGCGGA TCTACCACGT GGCTGGCAGC GTTTGGTACG TGAGTTCTTA
GACTGGATGC CACAACGTTT AGATGAGTAC GTCAAAGCCG CAATGGAGAA CTCGGTACTT
AAAGGACGTA CCCAAAACGT GGCGCAATAC GATGCCAAAC AAGCTTTAGC ATGGGGGGTT
ACTGGGGCAG GTCTACGTGC CACAGGTGTT GAGTTTGACC TACGTAAAGC GCGTCCTTAC
ATGGGTTATG AGAACTATGA CTTTGAAATC CCAGTAGGTT ATAACGGTGA CGCTTATGAC
CGCTGTATGG TGAAGATTGA AGAGATTCGT CAGTCACTAC GCATCATAAG ACAGTGTATG
GACAACATGC CATCTGGTCC TTATAAAGCG GATCACCCAC TGGCTGTACC GCCACCAAAA
AACCGTACAT TGAACGATAT TGAGACCTTG ATTAATCACT TTATCTCCGT ATCATGGGGA
CCGGTGATGC CAGCGGGCGA AGCATCTATG ATGGTAGAGG CGACCAAAGG TATTAACAGC
TACTACATTA CCTCAGATCG CTCGACCATG AGTTATCGTA CCCGTATTCG TACCCCAACA
TTTGCACATT TGCAGCAGAT GCCTTCTGTA ATTAACGGAA GCTTGGTATC GGATTTGATT
ATCTATTTAG CCTCAATTGA TATTGTGATG GCCGATACGG ACAGATAA
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| Protein sequence | MVTDNSKATD NSANPNMTQH AVLRELGHKF AGKFTEQFTF DGIPTIWVSR QDLLDVLMYL
RTLPKPYVML LDLSAMDERL RQHRDGLPAS DFTVFYHLMS LERNSDIRVK VALSEDDLKV
PTATKIWPNA NWYEREVWDM FGIVFDGHPH LTRILLPKYW EGHPLRKEYH ARATEFTPYF
LNNAKQQFEQ ENLRFVPEEW GMKRSGRDED FMFLNLGPNH PSAHGAFRLV LQLDGEEVID
CIPDIGYHHR GAEKMAERQT WHSYIPYTDR IDYLGGVMNE LPYVMAVEQL AGITVPERAQ
TIRVMMSEFF RITNNLLYFG TFIQDAGGMT PVFYMFTDRQ KAYDVIEAVT GYRMHPAWFR
IGGTAADLPR GWQRLVREFL DWMPQRLDEY VKAAMENSVL KGRTQNVAQY DAKQALAWGV
TGAGLRATGV EFDLRKARPY MGYENYDFEI PVGYNGDAYD RCMVKIEEIR QSLRIIRQCM
DNMPSGPYKA DHPLAVPPPK NRTLNDIETL INHFISVSWG PVMPAGEASM MVEATKGINS
YYITSDRSTM SYRTRIRTPT FAHLQQMPSV INGSLVSDLI IYLASIDIVM ADTDR
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