| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1693 |
|---|
| Symbol | |
|---|
| ID | 5205751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2092445 |
|---|
| End bp | 2093491 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640599918 |
|---|
| Product | NADH dehydrogenase subunit H |
|---|
| Protein accession | YP_001280583 |
|---|
| Protein GI | 148653490 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCTA TTCGAATCAT CCCTGAGGTG CCCAGCTTTT TAAATCAAGT CTTGTCCGTT
GACGCTTGGA ATATTTTATT TTTAGTGGGC CAGGCTTTAG TCATCTTCTT AGTGGTCGTG
ATTGTAGCGG CATTGATGAT TATCTATGAG CGCCGTATGT TGGCCTTGTG GCAAGATCGC
TACGGTCCAA ACCGTGTGGG TCCTTGGGGC TCATTGCAGC TGGTTGCGGA TATGCTAAAA
ATCTTCTTTA AAGAAGATTG GACGCCTAAG TTTGCTGATA AGTTCATGTT TATTCTAGCG
CCTGCTGTGG CGATGTTCAC GGCTTTGGCG TCATTTGCCA TTATTCCAGT CTCGCCCATG
CTTGGGGTCG CTGACTGGAA CATCGGTATT TTGTTTTTCT TTGCTATGGC GGGTATGGCG
GTATATGCCG TTATGTTCGG TGGCTGGGCC TCACAAAACA AATACTCTTT ATTGGGTGGC
CTACGTTCAG CAGCGCAAAC CATCAGTTAC GAAGTGTTTT TGGGCTTATC CTTAATGGGT
GTGGTCGCCA TGACCGGCTC GTTTAATCTT CGTGATATTG TGGTGGCCCA ACAAGGCGGC
TTTTGGCACT GGAACATCTT TCCACAATTT TTAGGCTTTT TAACCTTCGT GGTGGCTGGT
GTGGCAGTCA CTCACCGTCA TCCTTTTGAT CAGCCAGAAG CTGAGCAAGA ATTGGCCGAA
GGCTATCATG TCGAATATTC GGGCATGAAA TTTGGTATGT TCTTTATTGG CGAATATGTC
AACGTGGTAC TCATCTCTGC CTTGATGACT TGTTTGTTTT TTGGGGGCTG GGATGCACCG
CTGAACTTAG GCTTTACCAT TTTGCCACCT GCTTTTTGGT TTATGATTAA AACCTTATTT
TTCATGACTA TGTTCGTCTT AGCGCGCGGC TCATTAATGC GTCCAAGATA TGACCAAGTT
ATGAACTTTG GCTGGAAAGT ATGCTTGCCA GTGACTTTGA TTAACTTGAT GATTACCGCA
GCACTTATCT TAATTTCAGC CGCGTAG
|
|---|
| Protein sequence | MESIRIIPEV PSFLNQVLSV DAWNILFLVG QALVIFLVVV IVAALMIIYE RRMLALWQDR
YGPNRVGPWG SLQLVADMLK IFFKEDWTPK FADKFMFILA PAVAMFTALA SFAIIPVSPM
LGVADWNIGI LFFFAMAGMA VYAVMFGGWA SQNKYSLLGG LRSAAQTISY EVFLGLSLMG
VVAMTGSFNL RDIVVAQQGG FWHWNIFPQF LGFLTFVVAG VAVTHRHPFD QPEAEQELAE
GYHVEYSGMK FGMFFIGEYV NVVLISALMT CLFFGGWDAP LNLGFTILPP AFWFMIKTLF
FMTMFVLARG SLMRPRYDQV MNFGWKVCLP VTLINLMITA ALILISAA
|
|---|
| |