Gene PsycPRwf_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1684 
Symbol 
ID5206578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2082749 
End bp2083540 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content47% 
IMG OID640599909 
ProductMltA-interacting MipA family protein 
Protein accessionYP_001280574 
Protein GI148653481 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000137839 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGA TGACACAAAC CGCCCTGAAT ACTGCTGTGC TAAGTGCCGG TATCATGATG 
CTGGCCACTG CCGCCGCTCA AGCTGCACCT ACCACTACGT CCACAGCTTC CAGCGAAAAA
ATGGGCTTGA GTGTGGGTAT TAACCTTCGA GCCGAAAAAA GCGCCTATGA CATGGACAAC
ACCACCTCTG TGCTACCCAG CCTATTTTAT GACAATGGTC AAGTCTATGC CCGTGGCAGT
CAGTTGGGTG GTTATTTGAT TAATGATGAT GTCAATGAGG TGGCCGGTTT TATTCAGCCA
GGTGGCAGTC AGTTTGATCC CGATGATGCT GATGGTGCAA TGGCACAATT AGATGAGAGA
AAATGGTCAG GCATGGTAGG TGCCAGCTAT ATGCGTAAAA CACCAGTCGG CGGTTTTCGT
GGTCAAATTG CAACAGACGT TACTGGCCGC AGCGAAGGTA CAGTCGCTCG TCTAACGTAC
CTTGCCCGCT TAAATCCTGG CAAATGGACC ATTTACCCGA GCGCAGGTCT TGAGTGGGTA
GATAAAAACT ACAATGAATA CTACTACGGT ATTAGCGAAA AAGAGTCTGC TAAATCAGGG
CTAAACCCCT ACAAGCCAGA CTCAAGCATT AGTCCGTATG TAAGCATTAA CGGTACTTAT
GATTTAAATA AAGACTGGGA TATTTTTGTC GGTCAAAGCA TCAACTATCT GGCAGATGAG
CAGCGTGATA GCCCTATGGT AGATGACCGT TTTAACTTCA CCACCACCGT CGGGGTGATG
TACGAGTTTT AA
 
Protein sequence
MTKMTQTALN TAVLSAGIMM LATAAAQAAP TTTSTASSEK MGLSVGINLR AEKSAYDMDN 
TTSVLPSLFY DNGQVYARGS QLGGYLINDD VNEVAGFIQP GGSQFDPDDA DGAMAQLDER
KWSGMVGASY MRKTPVGGFR GQIATDVTGR SEGTVARLTY LARLNPGKWT IYPSAGLEWV
DKNYNEYYYG ISEKESAKSG LNPYKPDSSI SPYVSINGTY DLNKDWDIFV GQSINYLADE
QRDSPMVDDR FNFTTTVGVM YEF