| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1683 |
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| Symbol | |
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| ID | 5206577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2081918 |
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| End bp | 2082664 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640599908 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001280573 |
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| Protein GI | 148653480 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000993388 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATAA AAACCTTATT TAGCCGAGCC CCAGTCACTG CCTTATTGTT AATAAGCTTC
GTTGGCTTAT TTGTCATTCA GGTGGCCTCC GGCGTCGATA TTAATGAGCC AAGCTTACCG
TCTTTGCTGA AGTGGGGCGC TAATGCTCTA CCCTATACCG TAGGCTATGA GCCTTGGCGG
TTAATTAGCA GCGCCTTTTT GCACATCGGC TTGATGCATT TGTTATTTAA CTGCTTTGCT
ATGTACTACT TTGGCCAAGC TGCAGAAGTC AGCTTCGGCT CGATAAAATT TTTATTACTG
TTTTTACTAT CGGCCGTGGG TGGTAACTTA CTTAATAGCT ATGTTACTTG GTGGCAGATA
TTTTACAATA ACGGCGCACC AGGTATATCA GCAGGTGCTT CAGGCGGCAT TATGGGCATA
GGCATGGCAC TGCTAATGGT TGAGCTGCTC AAAAAAAGCC TACTCAAATT CCCAAGCCAT
GGCAAAAACC CTCAGCTAAG AAGCCTGGCG CTGATTATGG GCATTAACCT GATGTATGGT
TTTGCGGTAC CTGGTATTGA TAACGCAGGA CATATTGGTG GCGCACTCAC TGGGGCTGTA
TTAGCAGTGG GAATCATGGT GGGGTATCGC TACTCGATAC TGGGAGATAA ACCGTTATTT
AAGGCGTTAC CTTGGCTGAT TTTTGCTATT ATTACCATTA TTTTTTATCA GTTATGGCTA
GACTTACATC TACAGATAGG GCTATAG
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| Protein sequence | MTIKTLFSRA PVTALLLISF VGLFVIQVAS GVDINEPSLP SLLKWGANAL PYTVGYEPWR
LISSAFLHIG LMHLLFNCFA MYYFGQAAEV SFGSIKFLLL FLLSAVGGNL LNSYVTWWQI
FYNNGAPGIS AGASGGIMGI GMALLMVELL KKSLLKFPSH GKNPQLRSLA LIMGINLMYG
FAVPGIDNAG HIGGALTGAV LAVGIMVGYR YSILGDKPLF KALPWLIFAI ITIIFYQLWL
DLHLQIGL
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