| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1669 |
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| Symbol | |
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| ID | 5206929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2063454 |
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| End bp | 2064560 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640599894 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001280559 |
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| Protein GI | 148653466 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000382916 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TCAAGCTACG CATCAAAGAC AAACATGCAA ACCAGCTAAA CAAACTAGCT
GGGAGTGTTA ACTATGCGTG GAACTATGTT AATGCGTTAA GCTTTGAGCA TTTAAGACGC
ACAGGTAAGT ACTTTTCTGC CTATGATTTA AGCCAATACA CCAAAGGCAG TGGAGAGTAT
TTAGGCTTGC ACTCGCAAAC TTTGCAAGCC ATCAACGAAA CTCATGCCAA ATCTCGTAAG
CAGTTTAAAA AAGCCAAACT TAATTGGCGA ACCAACCGAC CCGATGCCAA ACGAAAAAGC
TTAGGCTGGA TACCTTTTAA AAAGTCTGCT ATCAAGTATC TACGTAGCAG ACAAACGGGG
AAGAAAGCAC TTAAATCAAC CATACAGCTA TCGCTCTGTA AAGGTCAAAA GCTTATCATA
GACGTATTCG ATAGCTACAA TTTGTCTTTG TATCAAATCA ATACGCTTGA GATAGTGCAA
GACAGCCGTA ACCGTTGGTA TGCCTGTATT ACCGTCAAAG ATTTTCCTAG ACAAGCAAGT
GGCAAAGGCA GCGTTGGTAT TGACTTAGGC TTAAAGCAGT CTGCTACCAC CTCAAACGGT
GACAAGCTGA CAACCAAACA AACGCAAAAG TGGGCTAAAA AGCTTGCAAT AGCTCAAAGA
GCGAAAAACA AACAGCGAGT CAAAGCAATC CATGCCAAGA TCAAAAACTC AAGATTAGAT
GCCATACACA AATTCACCAC CCAATTAGTT AAGGATAATG CCTTAATTGT GGTTGGTGAT
GTTAAATCCC GATCATTCAC CAATTCGATG ACCAACCTAG CTAAATCGAC ATACGATGCA
GGATGGTTTG AACTCAAAAG ACAACTGGAA TATAAATGCA AGTATGCAGG TTGTCAGCTT
GAGATAGTGA ATGAGAGTTA CACTACCCAA ACCTGTTCGT GCTGTCTTAA AATAAGTGAT
AGTAGTCCAA AAGGTAGAGC AGGTCTTGGA ATAAGAGGAT GGAGGTGTGC TGAGTGTGGC
ACATGGCATG ATAGAGATAT CAATGCTGCT AAGAACATCC TTGCGGTCGG GCTTGACCGT
CTTGTAGAAG GAATCCCCTC GGTTTAG
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| Protein sequence | MKTLKLRIKD KHANQLNKLA GSVNYAWNYV NALSFEHLRR TGKYFSAYDL SQYTKGSGEY
LGLHSQTLQA INETHAKSRK QFKKAKLNWR TNRPDAKRKS LGWIPFKKSA IKYLRSRQTG
KKALKSTIQL SLCKGQKLII DVFDSYNLSL YQINTLEIVQ DSRNRWYACI TVKDFPRQAS
GKGSVGIDLG LKQSATTSNG DKLTTKQTQK WAKKLAIAQR AKNKQRVKAI HAKIKNSRLD
AIHKFTTQLV KDNALIVVGD VKSRSFTNSM TNLAKSTYDA GWFELKRQLE YKCKYAGCQL
EIVNESYTTQ TCSCCLKISD SSPKGRAGLG IRGWRCAECG TWHDRDINAA KNILAVGLDR
LVEGIPSV
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