| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1668 |
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| Symbol | |
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| ID | 5206928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 2062443 |
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| End bp | 2063303 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599893 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_001280558 |
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| Protein GI | 148653465 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000770594 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAT TAACTCAAGC ACAATCGCAT CTTCAGTTAA ACGACATGAC CATTGGCAAT
GATCAGCCTT TTGTGTTGTT CGGTGGTATG AACGTATTAG AATCCAAGGA GCTGGCCTTT
GAAATTGCAG AAGGTTATAT CGATATCTGT AATCGTTTGG GTATCGGTTA TGTATTCAAA
GCCAGCTTCG ATAAGGCCAA CCGCTCAAGC TTAAACTCTT ACCGTGGACC CGGCTTAGAA
AAAGGGGTGG ACTGGCTGAG TCAAATCAAA GAAAAATACA ATGTGCCCAT CATCACAGAT
GTACATGAGC CGTATCAAGC CGAGCCTGTG GCAGAGGTGG CAGATGTTAT TCAATTGCCA
GCGTTTTTGA GTCGTCAGAC TGATTTGGTA CAAGCTATGG CCAAAACAGG GGCAATTATT
AATATCAAAA AGGCACAGTT CTTAGCCCCT CACGAAATGC GCCATATCAT TAATAAGTGT
CTAGAAGCAG GTAACGATAA GATTATCTTA TGCGAGCGAG GCACAGCTTT TGGTTACAAT
AACCTAGTGG TAGATATGCT TGGCTTTGAT ACTATGAAAC AGATGGATGT GCCGGTGTTC
TTTGATGTGA CACACAGCTT ACAACAGCCA GGTGCGCGCA GTGACAGTGC CGGTGGACGC
CGCGAGCAGA TTACCACGCT GGCACGTGCA GGTATGGCCA CTGGGCTTGC AGGGCTATTC
TTAGAGGCGC ATCCTGAGCC TGAAGTGGCC AAATGTGATG GCCCTTGTGC GCTGAGAATG
AGCCAACTAG AAGCCTTTTT ATCACAGTTA AAACAGATTG ATGACTTGGT GAAAGGCTTT
AGTGTGTTAG ACACTCATTA A
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| Protein sequence | MTALTQAQSH LQLNDMTIGN DQPFVLFGGM NVLESKELAF EIAEGYIDIC NRLGIGYVFK
ASFDKANRSS LNSYRGPGLE KGVDWLSQIK EKYNVPIITD VHEPYQAEPV AEVADVIQLP
AFLSRQTDLV QAMAKTGAII NIKKAQFLAP HEMRHIINKC LEAGNDKIIL CERGTAFGYN
NLVVDMLGFD TMKQMDVPVF FDVTHSLQQP GARSDSAGGR REQITTLARA GMATGLAGLF
LEAHPEPEVA KCDGPCALRM SQLEAFLSQL KQIDDLVKGF SVLDTH
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