| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1661 |
|---|
| Symbol | |
|---|
| ID | 5205351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2054678 |
|---|
| End bp | 2055502 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640599884 |
|---|
| Product | ribonuclease T |
|---|
| Protein accession | YP_001280551 |
|---|
| Protein GI | 148653458 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | [TIGR01298] ribonuclease T |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000109903 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT TAACTGTACT GGCAGATGAT GAGCAAAATG GGTTGAACGA TAATCAAGCA
GAGCCCAGAA CGTGTAGCAA TACCTCCACC AATGAAAACA GCTCGGATGC CACCTCAGAT
CATGGCAATG GTCTAGCACA GCAGCCGGTA TTAAAGATGG TGGAGCGTTT TCGTAAATTT
TTACCCGTGG TGGTGGATGT CGAAACCGCC GGCTTTAATG CGGCAACAGA TGCGTTATTA
GAGATTGCCT GTATCCCTAT TGTGATGGAT GATGAAGGCA AATTTGTCCC AGGTGAGCCG
CTAAGCGCCC ACCTAAATCC TTTTGAGGGT GCAAACTTAG AGCAGCGGGC ATTAGATTTT
ACCGGTATTG ATCCTAATAA TCCGATGCGT AAAGCCATTG CTGAAGAAGA GCAGCCTGCG
CTGCGCCGTA TTTTTAAAGA GCTAAAAGCG GTACGAAAAG ATAACGACTG TTTAAAATGT
ATTTTGGTGG GTCATAATGC TCACTTTGAT CTGTCCTTTT TAAACGCCGC CATTGAGCGT
ACCAACAGCA AAAACCACAA CCCTTTTCAC CAGTTCTCTG TACTCGATAC GGTGACTCTA
TCAGCGCTTG CCTTTGGTCA AACGGTATTG GCGCGCGCCT GTAGAGCAGC TGGTATTGAA
TTTGATGGCT CTGAAGCTCA CTCAGCACTG TATGACACTC AAAAAACCGC AGAGCTTTTT
TGCAAAATCT TAAACCATTA TTCGATGATG CCCATTAGCT TACCTGAAGA CAACACAACC
GATGAGCAAT CAGGAGTAGA GTTGGTTAAT AAAGATGATG GTTAG
|
|---|
| Protein sequence | MTDLTVLADD EQNGLNDNQA EPRTCSNTST NENSSDATSD HGNGLAQQPV LKMVERFRKF
LPVVVDVETA GFNAATDALL EIACIPIVMD DEGKFVPGEP LSAHLNPFEG ANLEQRALDF
TGIDPNNPMR KAIAEEEQPA LRRIFKELKA VRKDNDCLKC ILVGHNAHFD LSFLNAAIER
TNSKNHNPFH QFSVLDTVTL SALAFGQTVL ARACRAAGIE FDGSEAHSAL YDTQKTAELF
CKILNHYSMM PISLPEDNTT DEQSGVELVN KDDG
|
|---|
| |