| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1656 |
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| Symbol | |
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| ID | 5205346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2048272 |
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| End bp | 2049642 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599879 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001280546 |
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| Protein GI | 148653453 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.737178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCTA ATTTATCTTT TTCTGAGTTT AAACAGCACA GTTTACGCTT AGGTACCTTA
GTTCTTCCCA TCTTAATTAC TCAGTTTTGT CAGGCAGCGT TAGGCGTAGT CGATGCGCTG
ATGGCCGGCG GCGTTTCTGC TCTAGACTTG GCAGCAGTGT CCATTGGCTC AGGTATTTGG
CTGCCTTTGT TCTTGTTAGC CACAGGGACT TTGATTGCTA CCACACCACT GATTGGCGAA
AAGATGGGGG AAAAACTGCC CCATCACGTA CCACATATCA CTCAGCAGTC CTTGTGGGCA
GCATTATTTA TTGGCGCCAT TGGCCTGGTA GTGGTGTCCT TTACGCCTAA TATTCTAGGC
CCTATGGGCG TGCCAGCCGA TATTCAGCCT AAGGCAGCGC AATATCTACG CTTCGTAGCT
TGGGGCTTTC CTGCTATTGC CTGCTATGCG GTACTGCGCA GCTATTGTGA GGCGCTCGGT
AGACCTGAGC CGGTCACTAT TATCAGCTTA ATTGGCTTAT TTATTAATAT TCCAATCAAC
TACATCTTTA TCCACGGTTT ATTTGGCATG CCAGAGCTTG GTGGCGCAGG CTGTGGTCTG
GCTACCGCTT GTGTGCTGTG GATTAATGTC ATCTTACTAT CTATTTATTT GTTTTTCTCG
AAGCACACAA CCTTTGATGA GACCCGCTTC TTTTACAACT TCGCCAAACC TGATCGTCAG
CAAATCGGTA AGCTGTTTCG CTTAGGTGTC CCCATTGGCA TCTCGATATT TTTTGAGGCA
AGTTTATTTA GTCTGGCCTC TATCGTAATT AGCCCCTTGG GTGCAGTGGC TGTGGCCTCT
CACCAAGTGG CACTGGCGGT GACCTCTCAG CTGTTTATGA TTCCGATGTC AGTGGCGATG
GGTCTTACCA TTATGGTCTC TAATCGCTAT GGCGAGAAAA ACTGGCTGGC CTTACAGCAA
GTGCAGCGCA CGGGACTGAT TTGGACCGTG GGTATCGCGT TGGTGAGTAT GCTTGGGGTA
TGGTTGTTCC GTGAGAACTT AGCCGATGCC TTTACCGATA ATCCGGCCGT AAAAGCACAA
GCGATGTATT TATTGCTATT TGCCATTGCC TATCAATTGG TAGATGGATG GCAGGTCAAC
ATAGCGGGTA TCTTACGCGG TATGCAAGAC ACACAAGTGC CGATGTGGAT CACTTTATTT
TGTTATTGGC TGGTGGCTTT ACCATTAGGA ACCTATTTGG TTCGTTATAC CGACACAGGT
GCACAAGGAT TTTGGATGGC ATTGGTCACT GGCCTGAGTT TATCTTCGGT GTTATTGACA
TTAAGGCTAA TTTATCGTCA GCGCCAAGTT TTGAGCATAC CTGCGCGCTA G
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| Protein sequence | MLSNLSFSEF KQHSLRLGTL VLPILITQFC QAALGVVDAL MAGGVSALDL AAVSIGSGIW
LPLFLLATGT LIATTPLIGE KMGEKLPHHV PHITQQSLWA ALFIGAIGLV VVSFTPNILG
PMGVPADIQP KAAQYLRFVA WGFPAIACYA VLRSYCEALG RPEPVTIISL IGLFINIPIN
YIFIHGLFGM PELGGAGCGL ATACVLWINV ILLSIYLFFS KHTTFDETRF FYNFAKPDRQ
QIGKLFRLGV PIGISIFFEA SLFSLASIVI SPLGAVAVAS HQVALAVTSQ LFMIPMSVAM
GLTIMVSNRY GEKNWLALQQ VQRTGLIWTV GIALVSMLGV WLFRENLADA FTDNPAVKAQ
AMYLLLFAIA YQLVDGWQVN IAGILRGMQD TQVPMWITLF CYWLVALPLG TYLVRYTDTG
AQGFWMALVT GLSLSSVLLT LRLIYRQRQV LSIPAR
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