| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1651 |
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| Symbol | |
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| ID | 5205659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2040776 |
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| End bp | 2042722 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640599874 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001280541 |
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| Protein GI | 148653448 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.613844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCT CTTACAGCCC TTTGTATCGC AGTGTTGTTA CCGCTTTGGC ATCTTCTAAC
TTGACCCCAA AAGCTTTGAC TATAGTGTCT GCTCTTGCAG TTTGTATGCC TGCTATGGCC
GCTCAAAATC AAGGGGAAGT GGATGCTGAG CAGCCTAGAA TAAATTTTCC AGCGATTACG
GTTACTGCAA CCCGCACACC GACTGCTGTG AATAACACCA TTGCCCAAAC TCGTGTTATT
GATAGCCAAG AGTTAAGTAC TTATAAAGGC CAAACAGTGC TTGATGTTTT AAAGCGTCAG
CCGGGCTTTA GTTACTATCA AAGTGGTGGC ATGGGAACAA AAAGCAGTTT TTATCTGCGT
GGCTATGATA GCCAAAGTAT TTTAGTACTG ATTGATGGCA TTCGCTACAA TGCAGCTTCT
ACAGGGCGTG CTGCTCTTGA ACTATTTCCT GCAGACCAAA TCGATCATAT AGAGATTTTG
TATGGTGCTT CTGGTTCTAG TATCTATGGT GCGGATGCGG TAGGTGGCGT TATTCAGATC
TTTACCAAAG GTCAAAATGT TGATCAAAAT CAATTCTCGG TAACCGCTGG TGCTGGTAGT
AATGACCACT ATCTGTATGG CGCTTCAGCT CAGATGCGTA ATGAAAAAGG CAGTAGCTTA
AGCTTAGCAG CTAGCCGTAA TCAAACTAAA GGGATTGATG CTATAAAATC AGGCGGTGAT
GCTTATAAAG ATGATGATGG TTTTAATTCT AACAATTTCA GCTTATCTAT GCAGCATAAA
CTTAACGATG CTGTGACTAT TGGTGCAAAT GGCATATATG CTAAATCAAA TACAGAATAC
GACTCTGGTT CTACTTTTAT AGATGCAAAC CAAGACAATA AAAATTATGT ATTTAATACT
TTTATAGATA TAGAAAATAA GGGTTTAAAT ACCAAACTTC AATATGGTGA AAGTACGGAC
AAAAGAGTCA ATTTCGATAA AAACTCACCT AATGGCAGTT TCTTTGACAC AAAAGATAAA
CAAGCTAACT TGCAGTTAAC TTACCCTACT AATATGGGCA CTTTGACTGG TGGTGCAGAA
TGGTTAAGAC AGGAAGCAGA TACTAGCTTA TATGCTGGGT CACATGAACG TAAAATAAAG
AGTATTTTTA CAGGCTATTT GCTAAATACC GATCAGTTTG ATGCACAAGC TAATGTGCGC
TATGATGATA ACTCTCAGTT TGGGTCAGAG ACCACCTATA ATGTTGGAGG CGCATATAAA
TTTAGCCCTG AGCTTCGCGC TGGTGCTTCT TTTTCAACGG GTTTTAGAGC GCCGTCCTTA
GATACAATGT ACGATAACTT TAGCGGTAAC CCTAACTTAA AGCCAGAGAC CTCTGATAAC
TACGAAGTTT TTATTGAGAA GAGTGATGAC CATCACAAAA CTCGTTTGAC AGGCTATTAC
TCAGATGTAG AAGACCTAAT TGACTATGAT GGTGGCAATA ACTGGAGAAT GGGTAACATT
GATAAGGCGC GTATTAAAGG CATAACTCTG GTTTCTGACT GGATCGTAAA TCAGTATATC
TTTGGAATGA ACTACGACTA CCAAGATGCT AAGAACCTTT CTGGTGATTT CAAAGGTGAA
CAAATTAAGT TTCGCCCAAA GCATAAGGGC TTGGTATACG CAGGCTACAG AAATTCAGAA
TTTGATGTTC GTGCAGAAGT GCAGCATATT GGTAAGCGCT ATGCGCTTGA TGGTGAGTGG
TATGGCCCAA CCAGACTAGG GACTAAAATG CAACATGCTA ATCTTGTTAA CTTAAGTGCA
AACTATTATG TATCCCCTAA TTTGACCATT AACTCACAGA TTAATAACTT ATTTAATAAA
GAGTATACGT CAATTGATAC CTATGGGACT CGTTATAATG AAGACGGCAC CAACTTCTTT
ACCTCACTAA CCTACACCTG GAAATAA
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| Protein sequence | MKTSYSPLYR SVVTALASSN LTPKALTIVS ALAVCMPAMA AQNQGEVDAE QPRINFPAIT
VTATRTPTAV NNTIAQTRVI DSQELSTYKG QTVLDVLKRQ PGFSYYQSGG MGTKSSFYLR
GYDSQSILVL IDGIRYNAAS TGRAALELFP ADQIDHIEIL YGASGSSIYG ADAVGGVIQI
FTKGQNVDQN QFSVTAGAGS NDHYLYGASA QMRNEKGSSL SLAASRNQTK GIDAIKSGGD
AYKDDDGFNS NNFSLSMQHK LNDAVTIGAN GIYAKSNTEY DSGSTFIDAN QDNKNYVFNT
FIDIENKGLN TKLQYGESTD KRVNFDKNSP NGSFFDTKDK QANLQLTYPT NMGTLTGGAE
WLRQEADTSL YAGSHERKIK SIFTGYLLNT DQFDAQANVR YDDNSQFGSE TTYNVGGAYK
FSPELRAGAS FSTGFRAPSL DTMYDNFSGN PNLKPETSDN YEVFIEKSDD HHKTRLTGYY
SDVEDLIDYD GGNNWRMGNI DKARIKGITL VSDWIVNQYI FGMNYDYQDA KNLSGDFKGE
QIKFRPKHKG LVYAGYRNSE FDVRAEVQHI GKRYALDGEW YGPTRLGTKM QHANLVNLSA
NYYVSPNLTI NSQINNLFNK EYTSIDTYGT RYNEDGTNFF TSLTYTWK
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