| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1647 |
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| Symbol | trpD |
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| ID | 5205655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2035861 |
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| End bp | 2036970 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599870 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001280537 |
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| Protein GI | 148653444 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.41788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAATA CCGCCTTATC TACCGCTGAG CTGACTGATG ATCAAGTTCA TGACATTCTC
ACCACAGCCT TAGCCCGCAT ACTCAGACGT ATTGATCTAA CGCAACAAGA GATGCGTCAA
ATTATGACCA TTATTATGGA TGGTCGTTGC CCTGATGCCA TGCTAGGCGC CCTACTTACA
GGGCTTAATA TGAAGAGTGA GTCTATTGAT GAGATTACTG CCTCTGCCAG TGTGATGCTT
GATTTTGCCA AAAAAATTGA ACCAAAAAAC CGCACAAATA TGGTCGATAT TGTTGGTACG
GGAGGCGATG GCAGTAACTT ATTTAACGTC TCTACTGCCT CAGCATTCGT GGCCGCTGCT
GCAGGTGCGA CTGTCGCCAA ACATGGTAAC CGCGGGGTAT CATCAAAATC TGGTAGCTCA
GACTTACTGG AGCAGGCAGG TCTTAATCTG AACATCACCC CAGAGCAAAC GCGCGAATGT
ATTGAGACTC AAGGCATCGG CTTTTTGTTT GCACCCAATC ACCATACGGC GATGAAGCAT
GCCATTCCCG TACGCCGAGC TTTAAAAGTA CGAACCATAT TTAATATTCT AGGCCCGCTG
ACCAACCCAG CTGGGGTCAA AAACTTAGTG GTTGGGGTAT TTACTGATAA TATGTGTGAG
CCTTTAGCAC ACGTATTCAA AAACTTAGGC GCCAAGCATG TGATGGTGGT CGGCTCAAAA
GATAGACTGG ATGAAATCAG CCTGGCAACC AGTACCAAAG TGGCAGAATT AAAAGACGGT
GAGGTTACCG TGTATGACAT CTTCCCAGAA GATGCCGGTA TTGACTCTCA GACCTTAGTC
GGACTTGACG TCAACTCTTC TGAACAAAGC CTGCAACTGA TACAAGCCGC GCTATCTGGT
AAAGAGACCA ATGACTTTGG TATTGCCCAA AACAAGGTCA ATAAAGCGCG TGACATGATT
GCCTTAAACG CAGGCGCTGC CATCTATGTC GCCGGATTGG CCAGTAACTT CCCTAATGGG
GTAAATCAGG CCCAAAACAT CCTCCAAAGC GGTAAAGCCC TGCAAAAAAT GCAGGCATTG
GCTGAATATA CCCAAACCTT TGATCGCTAG
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| Protein sequence | MPNTALSTAE LTDDQVHDIL TTALARILRR IDLTQQEMRQ IMTIIMDGRC PDAMLGALLT
GLNMKSESID EITASASVML DFAKKIEPKN RTNMVDIVGT GGDGSNLFNV STASAFVAAA
AGATVAKHGN RGVSSKSGSS DLLEQAGLNL NITPEQTREC IETQGIGFLF APNHHTAMKH
AIPVRRALKV RTIFNILGPL TNPAGVKNLV VGVFTDNMCE PLAHVFKNLG AKHVMVVGSK
DRLDEISLAT STKVAELKDG EVTVYDIFPE DAGIDSQTLV GLDVNSSEQS LQLIQAALSG
KETNDFGIAQ NKVNKARDMI ALNAGAAIYV AGLASNFPNG VNQAQNILQS GKALQKMQAL
AEYTQTFDR
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