| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1644 |
|---|
| Symbol | |
|---|
| ID | 5204761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | + |
|---|
| Start bp | 2032262 |
|---|
| End bp | 2032987 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640599867 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001280534 |
|---|
| Protein GI | 148653441 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3471] Predicted periplasmic/secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.25595 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATT TACTATCAAA ATCATTATCT AAAGTAGGCC TACTATCAAT TATTGGCTGT
GCTGCAGCTT TTGCTCAAGG CGCACAAGCA GAGCCGACAG GTTACAACCA AATTAGCTTT
AATGTAGAAG CCAATCAAGA AGTAGAAAAT GATGAGGTAA CCGCCACTTT ATATAAGCAG
GCTCAAGCAA GCACCCCTAA GCAATTGGCA ACCCAGCTAA ATACAGCCAT CAATCAGGCA
CTAAGTATTG CTAAGCGCTA CCCCACAGTG ACAGCCACTA CCGGTCAACA AAACACTTAT
CCAAAGTACA ATGATGACGG TAAAATTGTT GGCTGGACAG GCACTGTAAG CGTTGATTTA
AAGAGCAATG ACTTTGCTAA GACCAGTGAG CTTGTGGCCA ACTTGCAAGA AAACTTAGTA
GTACAAAACC TTCAATTTGG TGTCTCTGAG AAAAAACAAA AAGAGCTTGA AAAAGAGCTG
ATCAAAAAAG CTTCTTTACA ATTTAAAGAG CAAGCCAAAT CATTGGCAGA AACGTGGGGC
ATGAGTGGCT ATCAAGTTAT TAACGTATCT ATTAATACCA ACAGTGGCTA TAATCCGCGT
CCGATGATGA TGATGCGTGA TGCGTCTGCT AAAGCGGGCG TGCCTGCTCA AAGCTTTGAG
GGCGGCAACT CACGTGTGGC TGTTACTGCC AATGGTACCA TTGAGCTTAT CCCATTTATG
AGATAA
|
|---|
| Protein sequence | MSNLLSKSLS KVGLLSIIGC AAAFAQGAQA EPTGYNQISF NVEANQEVEN DEVTATLYKQ
AQASTPKQLA TQLNTAINQA LSIAKRYPTV TATTGQQNTY PKYNDDGKIV GWTGTVSVDL
KSNDFAKTSE LVANLQENLV VQNLQFGVSE KKQKELEKEL IKKASLQFKE QAKSLAETWG
MSGYQVINVS INTNSGYNPR PMMMMRDASA KAGVPAQSFE GGNSRVAVTA NGTIELIPFM
R
|
|---|
| |