Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1635 |
Symbol | |
ID | 5205893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2021007 |
End bp | 2021441 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599857 |
Product | histidine triad (HIT) protein |
Protein accession | YP_001280526 |
Protein GI | 148653433 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000235606 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTCAAC TTCATCCAAC GCTTGCTAAA GATTCGTTTT TAGTTGGAGA TTTCCCGCTA TCAACTTGTC GTCTAATTAA TGACTGCCAG TTTCCTTGGT TGATTTTGGT ACCTAGAGTG GCGGGCGTAC AAGAGATTTA TGAATTATCT CCAGCCGACC AAGCACAATT TTTGCGTGAG TCCAGCTGGT TATCTAGTCA AATGGCCAAA ACCTTTAATG CGGACAAAAT GAATGTGGCT GCTTTAGGCA ACCAAGTCCC ACAGCTGCAC TTTCATCACA TTGTACGTTA TCAAAATGAT TTGGCTTGGC CAAACCCAGT TTGGGGGACG CCAGCAGTAC CTTATACCCA AGAGGTGTAT TTGGCCATGC AGCAGACACT TATGATGGCG CTCAGAGGCC ATAATCAGAT GCCATTTGAT TGGCAAATGC AGTAA
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Protein sequence | MFQLHPTLAK DSFLVGDFPL STCRLINDCQ FPWLILVPRV AGVQEIYELS PADQAQFLRE SSWLSSQMAK TFNADKMNVA ALGNQVPQLH FHHIVRYQND LAWPNPVWGT PAVPYTQEVY LAMQQTLMMA LRGHNQMPFD WQMQ
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