Gene PsycPRwf_1635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1635 
Symbol 
ID5205893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2021007 
End bp2021441 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content44% 
IMG OID640599857 
Producthistidine triad (HIT) protein 
Protein accessionYP_001280526 
Protein GI148653433 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000235606 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTCAAC TTCATCCAAC GCTTGCTAAA GATTCGTTTT TAGTTGGAGA TTTCCCGCTA 
TCAACTTGTC GTCTAATTAA TGACTGCCAG TTTCCTTGGT TGATTTTGGT ACCTAGAGTG
GCGGGCGTAC AAGAGATTTA TGAATTATCT CCAGCCGACC AAGCACAATT TTTGCGTGAG
TCCAGCTGGT TATCTAGTCA AATGGCCAAA ACCTTTAATG CGGACAAAAT GAATGTGGCT
GCTTTAGGCA ACCAAGTCCC ACAGCTGCAC TTTCATCACA TTGTACGTTA TCAAAATGAT
TTGGCTTGGC CAAACCCAGT TTGGGGGACG CCAGCAGTAC CTTATACCCA AGAGGTGTAT
TTGGCCATGC AGCAGACACT TATGATGGCG CTCAGAGGCC ATAATCAGAT GCCATTTGAT
TGGCAAATGC AGTAA
 
Protein sequence
MFQLHPTLAK DSFLVGDFPL STCRLINDCQ FPWLILVPRV AGVQEIYELS PADQAQFLRE 
SSWLSSQMAK TFNADKMNVA ALGNQVPQLH FHHIVRYQND LAWPNPVWGT PAVPYTQEVY
LAMQQTLMMA LRGHNQMPFD WQMQ