Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1627 |
Symbol | |
ID | 5205095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2013696 |
End bp | 2014340 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599849 |
Product | hypothetical protein |
Protein accession | YP_001280518 |
Protein GI | 148653425 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000013907 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000105101 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTCAAA ATTCAATATC AAACTCTTTA CTTAATGTCG TACTGGTACT GGCAGAGTCC GCCATTACTC TGGTATTAAG ATTCGACCCG AACCTACGCA AAGCTGTTTA TCCTTTGGCT CAAAAAAACA CTGTGGTGTG TGTGCGCAGC TATTTACCCC ACACCCAATT CTATGCCACC TTTACTACCA AAGGCGTTTT GTTAGATAGC AACCTACCCG CCTCTGTCTC AGAGCCAGAT GTGGTTATTA ATGCCTACTC TCACCAACTG ATCAATTCAT TCATCAGCAA TGATGCCACT CAAATCAATA AGCTGACTAT GCGCGGCGGT ACTGAGACAG TGACCGAAGT ACGTCACTTC CTATTACAAC TGGGTGTGGC CAGCTTATTC CAAGGCATTA TTAAAACGGT GAAAGGCAAA GACAAGGGCC GCGGCAAAAA AGACGATGCG GACAATGCTA ATAAGCCTGA TTATAAAGCG CGCATTGAAG AGCAGCAGCA GCAGCTAAAT ATATTAAGCA TGCGCAACCG CGAACTTGAA GTCAGCTTAA AAGAGGCTCA TAGCAAACAA AAAACCACAT TAATTGCGTT AATTGTGGCG TCATTAATTG CAGTTGCTTC AGTCATTGGC TGGCTGACTC AATAG
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Protein sequence | MSQNSISNSL LNVVLVLAES AITLVLRFDP NLRKAVYPLA QKNTVVCVRS YLPHTQFYAT FTTKGVLLDS NLPASVSEPD VVINAYSHQL INSFISNDAT QINKLTMRGG TETVTEVRHF LLQLGVASLF QGIIKTVKGK DKGRGKKDDA DNANKPDYKA RIEEQQQQLN ILSMRNRELE VSLKEAHSKQ KTTLIALIVA SLIAVASVIG WLTQ
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