| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1620 |
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| Symbol | |
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| ID | 5206486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2003947 |
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| End bp | 2006592 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599842 |
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| Product | penicillin-binding protein 1B |
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| Protein accession | YP_001280511 |
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| Protein GI | 148653418 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B
[TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000878907 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000879141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGGCATAT ATCGGCTATT AGATGGCAAT TACATTGAAA AAAAGGCGGT TTTCAGTCAT
TATAATCGGG TCTTTTTTTA TGTTGGTAAA ACTATCGTGC ATCACAAACC CTCTCGCGCT
TCTTCTCATT TTGACCAATC ATCTGCACAA TTCTCCAAGT CCTCGTTTAG CGAAGGCAAA
CTTCCCAACC CGCAGCAGCA ACGCGGCTCA GTGATTGGCT TTTTTTTACT GATTATCATC
ATTGTCGGTA TGTTGATGCT GGCCATGTAT TTGATCAAGC AAGACCGCGT TATTACTGCC
AAATTTGAGG GCAAACGCTG GAACTTGCCA GCCAAGGTGT ACTCGCAGCC TTTAGAGCTT
TATCAAGGGG CAGCCCTCAC CAACAAGAAC TTAGATGCTT GGCTTGAGAT GCTCAATTAC
AAATCCAGCT CTAATTACAA CAATACTGGC ACCTATAACA AGTCCTCCGG CCAGTATGTC
ATTCATACCC GTGGCTTTCA GTACAGCGCC AATGATGTTG ACCCTGAGCA AGTGATTAAG
ATTAAAATCC AAGACTCTAA AGTCACCAGC ATTCAAAGTA CCGAACCCAA TGATACCGGT
ATTGTGCGTA TTGAGCCGGT TACCATCGGT GGTATTTATC CAGATAACAA TGAAGACCGC
ATCGTGTTGC CTATTGATGA GATTCCGCAG CCGTTGATTG ATGCGCTTAT CGCCACCGAA
GACCGCGGCT TTTATGAGCA CAAAGGCGTG TCGCTCAAGG GTATCGGCCG AGCACTGTAT
AACAACTTAA AAGGCGGCTC AATGCAAGGT GGCTCGACCA TCACTCAGCA GCTGATTAAA
AACTTTTATC TAAGCTCAGA TCGCACCTTT AAGCGTAAAG CCAATGAGGC GGTGATGGCC
TTGCTACTCG AGATGCACTA CAGCAAAGAC CAAATTTTAC AAACTTATTT AAATGAGATT
AACCTAGGTC AAAATGGCAA CCGTTCTATT AACGGCTTTG GGTTGGCTGC GCAGTTTTAT
TTTAATAAAC CGTTAAAAGA GCTGCGTATT GATCAGCAAG CCATGCTGGT GGGCTTAGCC
AAAGGCACAA GCTATTACAA TCCACGCCGC AATCCAGAGC GTGCCCTCAA TCGCCGCAAT
ACAGTGCTGG CCAATATGCT TGAAACGGGC AAAATTGATC AAGCCACTTA TGATGACGCC
ATTGCTCAAA AGCTTGATGT GGTACCTAAA CCAAGCGTAG GCAAAAGCCG ATTCCCCGAC
TTTTTGGACA TCGTAAAGCG TGAGCTGCAT GATAATTATC ATCCCGATGA TCTAAAAAAT
GAAGGCCTAC GCGTCTTTAG TACCTTAGAC CCTATCGCTC AGATGTCGGC TGATGCAGCG
GTACAAAAGC AATTATCAGG CTTACGAAAA AGCAGCAGCA AAACCAAGGG GCTACAAGCG
GCCTTGGTCA GTGCCAATCC AGCTTCAGGT GAGCTGATTG CTGCTGTGGG TAGTGGTAGC
GAATTTACAG GCTTCAACCG AGCGATAGAT GCCAAACGTC AAGTGGGCTC ACTGTTAAAA
CCCTTTATTT ATATGACGGC GCTACAAAGT GGCAAGTACA ATCTGGCCAG CCCTGTGAGC
GACAACCCAG TTACGCTAAC GTTACCAGAC AACACCACTT GGACCCCAAA AAACTACGAT
GGCCGAGACC ATGGTTACGT GCCCTTAACC ACAGCGCTGG CCAAATCTTA TAACCAAGCT
GCGGTAAATA CGGGTATAGA ATTTGGTGTG GGCCCGTTCG TCGATCAGCT TCACCGCTTA
GGTATTAAGG AGAAGATACC AACCTATCCT TCGTTGTTCT TAGGCTCAGT TGAGCTTAGT
CCTATGGATA TGCTTGGTAT GTATCAAGTC ATGGCCGCAG GTGGATTTCG CACGCCCATT
ATTAGTATCC GCTCTGTGGT TGATGACCGA GGTCAAATTC TGCAGCGCTC AGGGCTAGAT
ACCAAGCGCA GCGTGCCACC TGATGTCAAC TATCTAACCA ACTATGCGCT ACAAGAAGTG
GTGCGCAGTG GAACGGCAAG CTCGCTAAAA TCCTTAGGCA GTGATCTAAA TCTGGCCGGT
AAAACAGGCA CCACCAACGA CTACCGCGAC TCTTGGTTTG CCGGCTACAG TGGCAACTAT
GTCAGCGTAG TATGGGTGGG CCGTGATGAC AATAAGCCCA TTGGTTTAAG TGGTGGCAGC
GGTGCATTAC CTGTGTGGAA GGACTTTATG GGTCGTCTGC GCTTGACCCC TGTCGAGCTG
GTGCAGCCTG ACAGTGTAGA GTGGTTATGG CTAGAAAATG GCACCGGAAA ACTGTCGCAT
GAAAGCTGTG ACAATGCCCG CTACTTGCCC GTACTTAGCA GATATTTGCC TGAAGAGGCC
AGTGACTGCG CCCTTGCCAT CTATGAGCAA GAGCAGGCAC GCCAAAGACA GCAGTGGTTC
AATGATCAGC GCAAAGCTTT ACTGGATCAA AGCCGTCAGC TCGATAGTGT TCAAGAAGGT
ATGCCCGCCA ATACTGATTC AAGCGCTAAT GATGATGCCT CTGCAGGCAA TGCTCCTGAG
CAAGAAGGCT CAGAGCCTAC CAATAATGGT GATACTTGGT ATGATAAAGC GTTACAATGG
TTTTAA
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| Protein sequence | MGIYRLLDGN YIEKKAVFSH YNRVFFYVGK TIVHHKPSRA SSHFDQSSAQ FSKSSFSEGK
LPNPQQQRGS VIGFFLLIII IVGMLMLAMY LIKQDRVITA KFEGKRWNLP AKVYSQPLEL
YQGAALTNKN LDAWLEMLNY KSSSNYNNTG TYNKSSGQYV IHTRGFQYSA NDVDPEQVIK
IKIQDSKVTS IQSTEPNDTG IVRIEPVTIG GIYPDNNEDR IVLPIDEIPQ PLIDALIATE
DRGFYEHKGV SLKGIGRALY NNLKGGSMQG GSTITQQLIK NFYLSSDRTF KRKANEAVMA
LLLEMHYSKD QILQTYLNEI NLGQNGNRSI NGFGLAAQFY FNKPLKELRI DQQAMLVGLA
KGTSYYNPRR NPERALNRRN TVLANMLETG KIDQATYDDA IAQKLDVVPK PSVGKSRFPD
FLDIVKRELH DNYHPDDLKN EGLRVFSTLD PIAQMSADAA VQKQLSGLRK SSSKTKGLQA
ALVSANPASG ELIAAVGSGS EFTGFNRAID AKRQVGSLLK PFIYMTALQS GKYNLASPVS
DNPVTLTLPD NTTWTPKNYD GRDHGYVPLT TALAKSYNQA AVNTGIEFGV GPFVDQLHRL
GIKEKIPTYP SLFLGSVELS PMDMLGMYQV MAAGGFRTPI ISIRSVVDDR GQILQRSGLD
TKRSVPPDVN YLTNYALQEV VRSGTASSLK SLGSDLNLAG KTGTTNDYRD SWFAGYSGNY
VSVVWVGRDD NKPIGLSGGS GALPVWKDFM GRLRLTPVEL VQPDSVEWLW LENGTGKLSH
ESCDNARYLP VLSRYLPEEA SDCALAIYEQ EQARQRQQWF NDQRKALLDQ SRQLDSVQEG
MPANTDSSAN DDASAGNAPE QEGSEPTNNG DTWYDKALQW F
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