Gene PsycPRwf_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1612 
Symbol 
ID5206714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1993766 
End bp1995049 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content46% 
IMG OID640599834 
Productaspartate kinase 
Protein accessionYP_001280503 
Protein GI148653410 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000435622 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000129841 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATTGA TTGTACAAAA ATATGGTGGT ACGTCGATGG GCAGTATCGA CCGTATCAAG 
AATGTTGCAA AGCGGGTTAA ACGCTGGCAT GACCATGGGC ATCAAGTAAT TGTTGTCGTA
TCAGCCATGA GCGGTGAGAC GAACCGTTTA ATCGACCTGG CCACTCAAAT TAGTAAGTAC
CCTGATCCGC GTGAGTATGA CCAAATGGTC TCAACGGGCG AGCAGGTATC CATCTCCTTA
TTGTCTATGG CAATCAAAGA GCTGGGTATC GGTGCACGCT CCTTTACTGG CGGTCAAGTG
GCGATTAAAA CTGATAATAA GCACAATAAA GCACGCATTG AATCTATTGA TGCCGAAAAA
ATTCAAGCAC AGCTCGATGA CGGCAATGTG GTCGTGGTAG CAGGATTTCA GGGCATAGAT
GCCGAAGGCA ATATCACCAC CTTAGGTCGT GGCGGCTCAG ACACCACAGG TGTTGCCCTA
GCGGCAGCGT TAGGCGCTGA TGAATGCCAG ATTTATACGG ATGTAGATGG GGTGTATACC
ACCGATCCTC GCGTCACCTC AAAAGCACGT AAGCTTGATA AGATTACGTT TGAAGAAATG
CTAGAGATGG CGAGTCTGGG CTCAAAAGTT CTGCAAATTC GTGCCGTTGA GTTTGCTGGT
AAATACCAAG TACCTTTAAG AGTACTGTCG AGCTTCGATG AAGGTCAAGA CGGTAGCTTT
GATGAAGAAT TCCGCCAAAA CGTTGGCACA CTGATTACAG TAGACGAAGG AGACGACATG
GAACAGCCGG TCATTTCAGG CATCGCATTT AACAGAGATG AAGCAAAAAT TGTGGTGCGC
GGTGTGCCAG ATCATCCAGG CATTGCCTCT GGTATCTTAA CCCCCATTAG TAATGCCAAT
ATCGAAATCG ATATGATTTT GCAGAACCTA TCCGATCAAG GCTTAACTGA CTTTAGTTTT
ACTGTCAATC GTCCTGACTT TGACAAGGCC ATTACTATCT TAGAGAGCAT TAAAGGGGAC
ATCGAGGCCA AAGAAATCCA TGGCAATACC GATGTGGTCA AAGTCTCACT TGTGGGTGTT
GGCATGCGCT CTCATGCCGG TGTGGCCAGT AAGATGTTCC AAGTATTGGC CGAAAACAAC
ATCAATATCC AGATGATCTC TACCAGTGAA ATCAAGATCT CTGTATTGAT TAAAGAGCAG
CATCTAGAAA AAGCGGTTAA ATCATTACAC ACCGCCTTTG GCCTAGATCG TGCAGATGGC
GAAAGCAAAG TTGCGGGTCT GTAA
 
Protein sequence
MALIVQKYGG TSMGSIDRIK NVAKRVKRWH DHGHQVIVVV SAMSGETNRL IDLATQISKY 
PDPREYDQMV STGEQVSISL LSMAIKELGI GARSFTGGQV AIKTDNKHNK ARIESIDAEK
IQAQLDDGNV VVVAGFQGID AEGNITTLGR GGSDTTGVAL AAALGADECQ IYTDVDGVYT
TDPRVTSKAR KLDKITFEEM LEMASLGSKV LQIRAVEFAG KYQVPLRVLS SFDEGQDGSF
DEEFRQNVGT LITVDEGDDM EQPVISGIAF NRDEAKIVVR GVPDHPGIAS GILTPISNAN
IEIDMILQNL SDQGLTDFSF TVNRPDFDKA ITILESIKGD IEAKEIHGNT DVVKVSLVGV
GMRSHAGVAS KMFQVLAENN INIQMISTSE IKISVLIKEQ HLEKAVKSLH TAFGLDRADG
ESKVAGL