| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1607 |
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| Symbol | |
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| ID | 5206709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1982958 |
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| End bp | 1986299 |
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| Gene Length | 3342 bp |
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| Protein Length | 1113 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599829 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001280498 |
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| Protein GI | 148653405 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000123933 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTAATA CACACCAGCC CCTGTTCGTG GTAAACCAAC GAGCCGATAG CCTTTTTAGC
TCTACTATGA GCCCTACAGC GCACAGTCGA TTCAAAGTGC TGCTGCCCTT TCGCTATTCT
AAAATGGCGT GTGCTCTATC TGCGTGCCTA TTGCTGCAAG CTTATACCCC TATATCAGCG
TATGCCGCTG CTAGTGGCAC AGGTGCCAAA GTAGATCAAC CAAGTCGTGC TACTGACTCA
CAGCTTGAAG AAGCACTGAT TGCACTAAAG CTCAAGCAAG CAGTTGAGCA GGGGCTGATT
GACCCGAGTG TATTAGAAGA CTATCAGCGC GAAACGCTCA GCTCTGCTGG AACGCAGCCA
TCCAATTCAA ATACAGCCAG TACTGTGAGC AGTGCGACAA AAACGGCCAA TAATAACGGC
GCCGACCCAA ATTCTGACCC CATAGCCACC TTTGATCGTG TATTTGCTGA CAACAGCTTA
ACGACTAAGC CTCAAGCAGG CACAGATTTG GCCAATGCGG CCATCATGCA GACCCCGCAG
CAAATAGAGC AGGTGCTGGC AAAGATTGGT AGTCAAGTAC CCTCTGATTT TACCCAGCCT
ATCGCCCGTC TAGATGCCAC TTCGCCGCCG CTAGGCTTTG ACAATAGCTT AGATCAAAGT
GCCCAAATCA ATCCCAGCAA CCAGCAGACG CTTGGTATAG TCGATGACTC AGAGCCAAAT
GCTGCCACCG AGCCTGTATA TCAAGCCACA GATGTGGTGG TCAATCCTGA CAGCACAAAA
GCCAAAGCGG CCGAAAAGTC GGCGGAGCAA GCGGTAAAAA ACACCAATAT TGGTAAAGTA
GATGCTCAGA TTAAGCAGCA ATCAGGTGAG ATTACGGATG ATGTGGTAGA TAACTCGCAG
CAAAATGCTG CCGAGGTTGG CATTAATCCA GATGATTATT TGCCGCAGTA TGAGGGCGGC
CCCACTAAAG CACCAGTAGG CTCTGTTGTG ACTGAGACGG CTGATGAAGA TAGCAGCAAA
GCAAAGCCTG GCTTTATTAA GGGGTTATAT AACCGCTTTT TTAATGATGG CTATGCAGGC
TTACCGCGTA TTAGTGCCAA GATATATTTG CAGCAGCCTG CAGCCTCAGG CAAAAAAAAT
GCCCCGCCTC AGCTTGTTAA GGCAGACAAA GACACCCAGC CGGCTGCCAA CATCAAAGCG
GCTATGGAGA ACATCACCGT CGAGTCCATT TCAGACTTCG TGGCCGTGAC GCCTAGGCTG
CATCAAGAGG CCATCGATGC GGCGCAAGCG GTAGGTTATT ACGATATTAA GCTGAGCTTT
AAGCGGGTTG CCTCAGATGA GATTGCGGTG ATTATTGAGC ATCTTGGTGA GCCTGTAAAA
GTGAGCAGCC GCATTGTTGA TATTCGCGGT GAGGGATCAC AGTTGCCAGA GTTTCAACAA
ATTGCTGAAA AAACAGCACC CTTAGAGGGC GATATCTTTA ACCATGGGGT GTATAAAACT
GCCAAAAGTC AGATTGAGAC CACCAAAGAG CAATTTGGCT TTTTTGATGG GCAGTGGCTG
AACAAATCCG TGGATGTGAT TTTGCCTGAT AATACCGCAG ATGTAGATTT AATCTATGAC
ACAGGTCAGC GCTATCATTT TGATGAGGTG ATTTTCTTTA CCATTGACAA AGACACAGGT
GAGCTCACCA CAGATCCAGA TAAGCTGCCT GTTAAGCCTG AACTGCTGCA TCAGTTACAT
GAATTTAGAG CCGGAGATAA TTTTTATGCG CCGGAAGTGA CTAAGTTTAC CAATGACTTA
TCTGCCACCC GTTACTTCAA CTCAGTCAAC GTTGAGACCA TACGTCCTAG CCGCAGCACG
GGCACTTTAG GTTTTGATAA TTCATCTGAG CGAGCTGCTC AAGAGCAAGA TACGGCCGAG
AACAATACGG ATGGCTTATA TGATGAGCAA GGCAATCTAC TGGCTGATAA TAACTCAGAT
AAAACGGCCG AAAACGGTGC CAATGATGCC TTTAAGCCCC TTGAGTATTC TGTGGATCAA
GAAACCACTG AGAAGCTACA AGAAATCACC GCCAAAGCAC AGCGATTATC CAGACTACCT
GATGACCGAG TGCTAGATGA AACCGAAGAG CAGGCCAAAA GCTTATTGGG TAAAATCTCC
AATGCCATTA GTGGCACAGT CAAAAAGATA TTTCCCGATG AGGAAGACCC TTTGGCCGAT
ACCGACTCAT TACCCAGCGA CTTGGGTAAA ACCTTCTTGG CGAATCGCAA AACACCGCAG
CAAGTGGCTG AGACCAAGTC GGTACCTTTG TATGTGTTTG TGACGGCGGA TAAACCAAAA
GATGTGGATT TAGGTATTGG ATATGGTACC GATACCGGCG TGCGCGCAGT GGCACGTCTT
GAGAATAACC TCATCAACCG AGATGGCTAT CAGGCGGGTA TCAGTGTGGG CGCCTCAAAA
ATTAACAAGT CCATTAATCT GCACGCAAGC CGCCCGTGGA AGCACCCTTT AAATGATACT
CTAAGCGCCA ATATCAGCTA TGAGCAAGAA AACATCAACC AAGGTGATGG TAACTTAGAT
CTAGAGACCA ACACCATTAA AGCTGGTATC GCGCGTAACA TTCGTCGTGA TGAGGGCTGG
AATCGTACGT ACTCTTTAAG ATATCGCTTG GATGAGCTAG AAAGTGGGGT GACTGGCACT
GATCGTGAGA ACTTACCGGT GCCCTTTAAC CGCGAAGGCG CTCAATTTGA CCAAGAGGCG
CTGCTGCTGG GTTATCAACT GGATAAAACC AAAACCGACA GTGTCACCAA TCCAAGTAAG
GGCTGGCGTC AATACTATTC TATAGAAGCT GGGTCAGATA GTGCATTGAC CGATACCAAT
ATGGCCATTG CGCGGGCGGG GGTAAGTGGT GTCTATAGTT TTGGTGAGAT GAATAAGCAT
CAGGTCGTGG CCAGCTTAGA TGGGGGGTAT ATCTGGGCGG ATGAATTTGA AAACGTGCCT
TATAAGCTCA GATTTTTTGC TGGGGGTGAC CGCAGTATTC GAGGTTATGA CTACAACAGC
TTATCGACAC TAGAAAAAGG CTATCTGGTG GGTGGGCAAG TCTTGGCAGT GGGTAGTACA
GAGTACAACT ATGAATTTAA ACCGGGTCTG CGTGGCGCGG TATTTGCCGA CTTTGGTAAT
GCTTATGACA CCAATTTTGA GACTGAAACC AAGCTTGGGG TTGGCTTTGG CGTCCGTTGG
GCTTCACCTG TGGGCATGGT ACGCTTAGAC TTAGCAGCAG GCGTGTTAGA GGACAGTGTG
CCTATTCGAT TGCACTTCTT TATTGGGTCG CCTTTGCAGT AG
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| Protein sequence | MRNTHQPLFV VNQRADSLFS STMSPTAHSR FKVLLPFRYS KMACALSACL LLQAYTPISA
YAAASGTGAK VDQPSRATDS QLEEALIALK LKQAVEQGLI DPSVLEDYQR ETLSSAGTQP
SNSNTASTVS SATKTANNNG ADPNSDPIAT FDRVFADNSL TTKPQAGTDL ANAAIMQTPQ
QIEQVLAKIG SQVPSDFTQP IARLDATSPP LGFDNSLDQS AQINPSNQQT LGIVDDSEPN
AATEPVYQAT DVVVNPDSTK AKAAEKSAEQ AVKNTNIGKV DAQIKQQSGE ITDDVVDNSQ
QNAAEVGINP DDYLPQYEGG PTKAPVGSVV TETADEDSSK AKPGFIKGLY NRFFNDGYAG
LPRISAKIYL QQPAASGKKN APPQLVKADK DTQPAANIKA AMENITVESI SDFVAVTPRL
HQEAIDAAQA VGYYDIKLSF KRVASDEIAV IIEHLGEPVK VSSRIVDIRG EGSQLPEFQQ
IAEKTAPLEG DIFNHGVYKT AKSQIETTKE QFGFFDGQWL NKSVDVILPD NTADVDLIYD
TGQRYHFDEV IFFTIDKDTG ELTTDPDKLP VKPELLHQLH EFRAGDNFYA PEVTKFTNDL
SATRYFNSVN VETIRPSRST GTLGFDNSSE RAAQEQDTAE NNTDGLYDEQ GNLLADNNSD
KTAENGANDA FKPLEYSVDQ ETTEKLQEIT AKAQRLSRLP DDRVLDETEE QAKSLLGKIS
NAISGTVKKI FPDEEDPLAD TDSLPSDLGK TFLANRKTPQ QVAETKSVPL YVFVTADKPK
DVDLGIGYGT DTGVRAVARL ENNLINRDGY QAGISVGASK INKSINLHAS RPWKHPLNDT
LSANISYEQE NINQGDGNLD LETNTIKAGI ARNIRRDEGW NRTYSLRYRL DELESGVTGT
DRENLPVPFN REGAQFDQEA LLLGYQLDKT KTDSVTNPSK GWRQYYSIEA GSDSALTDTN
MAIARAGVSG VYSFGEMNKH QVVASLDGGY IWADEFENVP YKLRFFAGGD RSIRGYDYNS
LSTLEKGYLV GGQVLAVGST EYNYEFKPGL RGAVFADFGN AYDTNFETET KLGVGFGVRW
ASPVGMVRLD LAAGVLEDSV PIRLHFFIGS PLQ
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