Gene PsycPRwf_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1589 
Symbol 
ID5205594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1956224 
End bp1956796 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content51% 
IMG OID640599811 
ProductCMP/dCMP deaminase, zinc-binding 
Protein accessionYP_001280480 
Protein GI148653387 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000139633 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000269971 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGTGA CTGCTGTGAA TTTATTGACG CCTCATAGCG CTTTACTAAG TGAGGCCTAC 
CCTGGTGATC TAACCGCTGC TAACTATTGG CTACTCTCTG ATGTGGGCTT TATGCGCCGA
GCTTTAGCCT TGGCGCAGCA AGGCGCAAGT CAAGAAGAGG TGCCGGTGGG CGCGGTTTTG
GTGTGTGACA ATAAGATTAT AGGCGAGGGG TTTAATCAGC CCATTACCAC AAGCGACCCA
ACAGCTCATG CAGAGGTGGT GGCTTTGCGC TGTGCCTGTC AGACGCTGCA AAATTATAGA
TTGCCGCCCA ACACCACCTT GTATGTCACC TTAGAGCCAT GCACCATGTG CCTTGGGGCA
CTGATACATG CTCGGCTAGC AAGGCTGGTC TTTGCAACTT TTGAGCCGCG GGCAGGTATG
GTAGGCAGTC AACTGAATTT AACTGAAATG GACTTTTACA ATCATAAAAT GCAGGCGTAT
TCAGGGCTAC TGCAGCAGCA GAGCCAAACC CAGCTGCGCT CATTTTTTCG GGCCAGACGT
GGCAAAAAAA AGCCTCAAAA GCAGTCCGAT TAA
 
Protein sequence
MTVTAVNLLT PHSALLSEAY PGDLTAANYW LLSDVGFMRR ALALAQQGAS QEEVPVGAVL 
VCDNKIIGEG FNQPITTSDP TAHAEVVALR CACQTLQNYR LPPNTTLYVT LEPCTMCLGA
LIHARLARLV FATFEPRAGM VGSQLNLTEM DFYNHKMQAY SGLLQQQSQT QLRSFFRARR
GKKKPQKQSD