| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1588 |
|---|
| Symbol | |
|---|
| ID | 5205593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1955135 |
|---|
| End bp | 1955833 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640599810 |
|---|
| Product | cytidylate kinase |
|---|
| Protein accession | YP_001280479 |
|---|
| Protein GI | 148653386 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0283] Cytidylate kinase |
|---|
| TIGRFAM ID | [TIGR00017] cytidylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000000460348 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000979309 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTTC CTGTTATTAC CATTGATGGC CCAAGCGGCG CAGGAAAGGG CACAGTTTGT
CTAAAACTGG CACAAGCTTT AGGATATCGA CTATTAGACT CAGGCGCCCT ATACCGTATT
GTCGGTCTCA AGGCATTTGA GGCAGGTCTA TTAAATGAGT TATCCTTGAC TGAGCAAGTG
GTGGCCGATA TTACTGAGCT TACTCAAAGC TTGGATATTC AGTTTTTACC ACGTGACACA
GGTGACGTAG ATATTGTGGT CGATGGCGTT AATGTCGCCG GTGAAATCCG CAATGAAACG
GTCGGAGGCT ATGCCTCAAA AGTTGCTGCT TTGCCTAGCG TGCGAGAAGC GCTACTGGCC
TTGCAAAAGA ACATGGCCAA TGAGTCCGGC TTAATTGCCG ACGGTCGTGA TATGGGAACC
GTAGTGTTTC CTAATGCGGA TGCCAAAGTT TATTTGACAG CCAGCGCTGA AGCCCGAGCT
GATCGCCGAG TGGCTCAGTT ACAACAAGCG GGTGAACGTG CAGATTATGC CGCCATATTA
ACAAGCATCC AAGAAAGAGA TGAGCGCGAT GAGAATCGCA GTGTTGCTCC GTCCAAGCCC
GCTAAAGATG CTTTGGTATT GGACAGCTCA AGCATGAATG CGGACGATGT GTTTGCCCAG
ATTAAAAAGT TTTGTCAGCA AAAAGGCATA AGCTTTTAA
|
|---|
| Protein sequence | MSFPVITIDG PSGAGKGTVC LKLAQALGYR LLDSGALYRI VGLKAFEAGL LNELSLTEQV
VADITELTQS LDIQFLPRDT GDVDIVVDGV NVAGEIRNET VGGYASKVAA LPSVREALLA
LQKNMANESG LIADGRDMGT VVFPNADAKV YLTASAEARA DRRVAQLQQA GERADYAAIL
TSIQERDERD ENRSVAPSKP AKDALVLDSS SMNADDVFAQ IKKFCQQKGI SF
|
|---|
| |