| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1585 |
|---|
| Symbol | |
|---|
| ID | 5205042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1951224 |
|---|
| End bp | 1952297 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640599807 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001280476 |
|---|
| Protein GI | 148653383 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000057212 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00124037 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGTGCTAC TTATTGCCTT TATGGTATTG TCGGTGTTTG TGTCCTTTAT CTGCTCGGTT
TCTGAGGCAG CTTTATTGAC CATGACACCC TCTTATGTGG CTTCTATTGC AGAAGAAAAC
CCCACAAAAT CAGCGATGTT AAAAGAAGTT AAAGTCGATA AGATTGATCA GTCTATCGCG
GCTATTTTGA CCTTAAATAC AGTGGCACAT ACGGTCGGTT CTTTGGGAGC AGGGGCTCAG
GCCACTATCG TTTTTGGTAG TGAGTGGTTT GGCGTGTTCT CAGCCTTTAT GACCTTGCTG
ATATTGGTCG GTTCTGAGAT TATTCCTAAA ACCATTGGTA CGGTCTATTG GCGTCAACTT
TCAGGTCCAG TGGCGTATTT TGTTAAAGCC ATTATATTCT TGCTGTATCC GCTTATTTGG
TTCTCCGAAA AAATCACCAC TTTATTGATC CGTGGCAAAA AGGCCAATAC CTTTAGCCGT
AATGAGTTTG CTGCGCTTGC TAGTGTGGGT GAACAGTCGG GTCAAATTGA TCCATTAGAG
TCAAGAATTA TCCGTAACCT GTTGGCATTC GGTGCGATTA AGGTTGAGGA TATCATGACG
CCGCGCTCAG TCATGCATGC GTTTAATCAG TCGATTACGG TTGCTGAACT ATTGGCCAAT
CGTCCTAAGC TGATGTTCTC AAGATTGCCC ATTTATGATG AGGACTTAGA TAAGGTGACC
GGCTTTGTTT TAAAGTCGGA TATTTTATTG GCCAAAGCTA ACAATCATAT GGATAAGCCT
TTAGAGAGCT ATAAGCGCGA GATTACCTTT GTATTCTCCA AAATGAAGCT GTTTGATTTA
TTAGATTTAA TGCTTAATAG CCGCATTCAT ATTGCGGTGA CTGTGGGCGA GTATGGTGAG
GTCAAAGGCT TGGTTACTTT AGAAGATGTG CTTGAGACCT TATTGGGTCT TGAAATCGTC
GATGAAGTCG ACCGCGTTGA GGACATGCAG GTACTGGCGC GTCAGATGAT GCAGCGCCGT
TCAGCGAGGT TAGGGATGTT GGTAGAAGAT GATGATACGC CGATAGACCC TTAA
|
|---|
| Protein sequence | MVLLIAFMVL SVFVSFICSV SEAALLTMTP SYVASIAEEN PTKSAMLKEV KVDKIDQSIA
AILTLNTVAH TVGSLGAGAQ ATIVFGSEWF GVFSAFMTLL ILVGSEIIPK TIGTVYWRQL
SGPVAYFVKA IIFLLYPLIW FSEKITTLLI RGKKANTFSR NEFAALASVG EQSGQIDPLE
SRIIRNLLAF GAIKVEDIMT PRSVMHAFNQ SITVAELLAN RPKLMFSRLP IYDEDLDKVT
GFVLKSDILL AKANNHMDKP LESYKREITF VFSKMKLFDL LDLMLNSRIH IAVTVGEYGE
VKGLVTLEDV LETLLGLEIV DEVDRVEDMQ VLARQMMQRR SARLGMLVED DDTPIDP
|
|---|
| |