| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1582 |
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| Symbol | |
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| ID | 5205039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1945742 |
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| End bp | 1946974 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599804 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001280473 |
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| Protein GI | 148653380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0208694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCA TCGCCTATAG GTTAAAACGC AAAGACAAAT CCCATTCAAA TCCAGTTGTA
TCACACCTAC CCTCTCAAAG CTTCAAACGC GTTAACCGCT TTGTACCTAC CCTGTTTTAT
ACCGCTTTCG GTACTAAAAA ACCCCTTGCG AGCAAGAAGT TTGCAAAGAC CAAGATGCTG
GTGCAAATCT CCAGTATTGC GCTACTGTCT TTGCCGGCCA AAAGTTTGAC CACCTCCTTA
TTTAGCACAG ATTCTGTAGC ATACGATAAG GTTATGGCGT CAAATACTCT CACCTTAGCC
TCAGTCAAAG GTGATAGCAC TTATTTTGCG ACAGATGGCT TTCAGCATGG CTTTGGCTAT
GACATTGCGC GCAGTTATGC CAATCAATTA GGGGTGACGC TGCAGGTGCA AGATTACCCC
AATGAAGCAC AAGCACTGCA AGCTGTGCGT CAAGGCAAAG CAGATATGGC TCTGACGACA
GCCAGTACAA AGCTAACCGA AGATACCGGA CTTAGCGCCA TTAACATCAG TTGCGGCTTT
GACACCACTT TGGCCACTAA TGGGCTACAT CCTAAGACCA ATTGGGCTTT TCGTAGTGGC
AACGACCCGC TTGCCATTAA AGCCAGTGAT TTTTTGTGCG AAAATGGCCA GTTAATCAAC
ACCGCCAAAA TTGCCAATTT TTATGATCAG ACGTTATTAA AAGACGATTA CAATCGCGAG
CACTTTGAGC AAGCGCTCAC TGCCAATTTG CCTCATTATA AGTCCTCCTT CCAGCAGCAA
GCCGACACTT ATGACCATGA TTGGCAGCTG CTTGTCGCCA TGGGCTATCA AGAGTCGCAT
CTGGATGCTA ATGCCACCTC ACCCACAGGG GTACGCGGGC TTATGATGCT GACCAATAAC
ACCGCCAAAG CCATGGGCGT CTCTGACCGC ATCGACCCCT ATCAAAGCAT CGGCGGTGGT
GCACGCTACT TAGAACAAAT GAAGGCCGAA TTTAGGGATG TGCCAAACCC AGATAGACTG
TGGTTCGCCC TCGCCTCTTA CAACATGGGT CCCAATGCGG TTAAGAGCAT CCAAAGCAAA
GTGTCTAAGG CCGGACAAGA CCCCAAAAGC TGGACCAATG TGTATGCTTA TATGTCCGAC
CATGCCGGAA GCAACTCACG CTATACCCAG TGCATGCACT ATGTGACCAA CATTCGCAGC
TACTTAGAGT CACTAAAAAT GCGCACCGCT TAA
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| Protein sequence | MQRIAYRLKR KDKSHSNPVV SHLPSQSFKR VNRFVPTLFY TAFGTKKPLA SKKFAKTKML
VQISSIALLS LPAKSLTTSL FSTDSVAYDK VMASNTLTLA SVKGDSTYFA TDGFQHGFGY
DIARSYANQL GVTLQVQDYP NEAQALQAVR QGKADMALTT ASTKLTEDTG LSAINISCGF
DTTLATNGLH PKTNWAFRSG NDPLAIKASD FLCENGQLIN TAKIANFYDQ TLLKDDYNRE
HFEQALTANL PHYKSSFQQQ ADTYDHDWQL LVAMGYQESH LDANATSPTG VRGLMMLTNN
TAKAMGVSDR IDPYQSIGGG ARYLEQMKAE FRDVPNPDRL WFALASYNMG PNAVKSIQSK
VSKAGQDPKS WTNVYAYMSD HAGSNSRYTQ CMHYVTNIRS YLESLKMRTA
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