| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1580 |
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| Symbol | |
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| ID | 5205037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1942145 |
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| End bp | 1943476 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599802 |
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| Product | 2-alkenal reductase |
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| Protein accession | YP_001280471 |
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| Protein GI | 148653378 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0204264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAT CATCAAAAAC AAATATTATT TGGAAAGTTC TACCCTGGTT ATTACTAATA
GCAGTTCTAG CGGCTTTTAT TTGGGTGTAT ATTGACCAAA AAACCCGCCA ACAAAGTGCT
TGGGAGCCGC CTCGTAGCGA GACCACCTCT ATTCCGCTCA ATAATGGCCG CGTGTCAGAT
AGACCGGAGC CGGTTACCTC TTATCACAAT GCTGTGGCCA GAGCCTCTCG CTCTGTGGTG
AATATCTATA CGACCCAAAT TGTACAAAAT CCTTATATGA ACGACCCCGT ATTACGTCGT
TTTTACGAGT TTCATGGCCA AACGCCACAA GCCGGCCAAG AGACCAATCT AGGTTCAGGG
GTTATCGTCT CAACCGATGG CTATATTGTC ACCAATGCCC ACGTGATTGC CCAAGCCGAT
GAGATTGTGG TGGCATTGAA TGACGGCCGC AAAGCGGTGG CCAAGGTTGT GGGCACTGAT
CCTGATAGTG ATTTGGCAGT GATTAAAGTC GACATGAGTG GTCTTGAGCC ATTAGCGTTT
AGAGAGCTGC CTATTGAAGT GGGCGATGTG GCTTTGGCCA TTGGTAACCC CTTTGGTGTG
GGTCAGACCG TTACCCAAGG CATTATCTCA GCCACAGGTC GTACCGGTCT TGGCGTCAAC
ACTTATGAAG ACTTCATTCA GACGGATGCT GCTATTAACC CAGGTAACTC CGGCGGGGCA
TTGGTAGATG CTCGAGGCGA ATTGGTGGGT ATTAACACCC TTATCTTCTC GCGCTCAGGC
GGCTCAATGG GGATTGGCTT TGCTATTCCA ACGGCTTTGG TTGAGCAGGT GATGAATGCC
ATTATCAAAG ATGGTAAGGT CAGTCGCGGC TGGCTAGGTA TAGAAGTATT ATCTCAGCTG
CGTGATCCTT CACAAATTGA TAATACCACA GGGGTAGTGG TGCGTAATAT CATTGCCGGT
AGCCCTGCCG CCAAAAGTGG CCTAAAAGTT GGGGATGTGA TTTTATCTAT CGATGGCGTT
GAGATGACTG ACTCTAATCG CCTTATTCAG CATGTGGCCA GAAAGATGCC GCATGATACC
CTTAAGGTAC AAGTGCTGCG TAATTCAAAG AATATGAACA TCGATATCAC CCTCGCGGAG
CGTCCAACTC AGACTGAAGT TGTGCCACCT CAGATGCCCA TGTCCAATGA CGACCCTGAG
CTTTATTTAG AGTCACCAGA AGGCAATGCC AATCCTTTAA GTGATGAGCA GCGTGCTCAG
CTAAGAGAGG AGCTCATTGA GCTGTTTGAA AATGGCGCAA GACCCAAAGT AGACCCACTG
CCTCATCAGT AG
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| Protein sequence | MSASSKTNII WKVLPWLLLI AVLAAFIWVY IDQKTRQQSA WEPPRSETTS IPLNNGRVSD
RPEPVTSYHN AVARASRSVV NIYTTQIVQN PYMNDPVLRR FYEFHGQTPQ AGQETNLGSG
VIVSTDGYIV TNAHVIAQAD EIVVALNDGR KAVAKVVGTD PDSDLAVIKV DMSGLEPLAF
RELPIEVGDV ALAIGNPFGV GQTVTQGIIS ATGRTGLGVN TYEDFIQTDA AINPGNSGGA
LVDARGELVG INTLIFSRSG GSMGIGFAIP TALVEQVMNA IIKDGKVSRG WLGIEVLSQL
RDPSQIDNTT GVVVRNIIAG SPAAKSGLKV GDVILSIDGV EMTDSNRLIQ HVARKMPHDT
LKVQVLRNSK NMNIDITLAE RPTQTEVVPP QMPMSNDDPE LYLESPEGNA NPLSDEQRAQ
LREELIELFE NGARPKVDPL PHQ
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