Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1578 |
Symbol | nrdB |
ID | 5205035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1940551 |
End bp | 1941684 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640599800 |
Product | ribonucleotide-diphosphate reductase subunit beta |
Protein accession | YP_001280469 |
Protein GI | 148653376 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0185288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTACT CAATCTTTAG CCAAACAAAA AATGACGCGC TTAAAGAGCC GATGTTTTTT GGTCAGCCCG TTAACGTAGC ACGCTATGAC CAACAAAAGC ACCCCATCTT TGAACAACTT ATCGAAAAGC AGTTGTCATT TTTCTGGCGT CCAGAAGAGG TTGATGTATC AAAAGACCGT ATCGACTACG GCAACTTGTC CACGCATGAG CAGCATATTT TTATCAGTAA CCTAAAATAC CAAACCTTGC TAGACTCCAT TCAAGGTCGT AGCCCAAACG TGGTGCTATT GCCGTTGGTA TCTATCCCTG AGCTTGAGAC TTGGATTGAA ACATGGTCAT TCTCCGAGAC CATCCACTCA CGCAGCTATA CCCATATTAT TCGTAATATC GTCAACGACC CTGCTGTGGT ATTCGATGAC ATTATGGAAA ATGAGCACAT TCTACAGCGT GCTTCAGACA TTGCTTATTA TTATGATGAC TTGTACCAAC ATTCACAGCT ATATAGCCTA TTTGGCCCAG GTACACACAT CGTCAATGGT GAAGAAAAGT ATGTCGACTT ACGCAAACTA AAAAAACAGC TTTATCTGTG CTTGATGGCC GTTAACGTAT TAGAGGCCAT TCGCTTCTAC GTATCATTCG CCTGCTCGTT TGCCTTTGCT GAGCGCAAAC TGATGGAAGG TAACGCCAAG ATCATTAAGC TTATCGCCCG TGATGAAGCG CTGCATTTAA CCAGTACCCA GCACATGATT AATATCATGG CGTCAGGCAA AGATGATCCT GAAATGGCAG AGATTTCTGC ACAATGTCAT AACGAGAGTA TTGAGATTTT CCGAAAAGCG GCTGAACAAG AAAAAGAATG GGCAGGTTAT CTGTTTAAAG ACGGCTCTAT GATTGGCCTA AACAAAGACA TCCTATGCCA GTATGTCGAG TATATTACTA ACTTACGTAT GGAAGCGGTC GGCTTACCGG GTATCTTCCC TGAATCTAAG AGCAACCCTA TTCCTTGGAT TAATACTTGG TTGTCATCAG ATAACGTACA GGTAGCACCG CAAGAGACTG AAATCAGCTC CTACCTTGTC GGCCAAATTG ACTCTGATTT ATCAGACAGT GACTTTGATG ACTTCGAGTT GTAA
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Protein sequence | MTYSIFSQTK NDALKEPMFF GQPVNVARYD QQKHPIFEQL IEKQLSFFWR PEEVDVSKDR IDYGNLSTHE QHIFISNLKY QTLLDSIQGR SPNVVLLPLV SIPELETWIE TWSFSETIHS RSYTHIIRNI VNDPAVVFDD IMENEHILQR ASDIAYYYDD LYQHSQLYSL FGPGTHIVNG EEKYVDLRKL KKQLYLCLMA VNVLEAIRFY VSFACSFAFA ERKLMEGNAK IIKLIARDEA LHLTSTQHMI NIMASGKDDP EMAEISAQCH NESIEIFRKA AEQEKEWAGY LFKDGSMIGL NKDILCQYVE YITNLRMEAV GLPGIFPESK SNPIPWINTW LSSDNVQVAP QETEISSYLV GQIDSDLSDS DFDDFEL
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