Gene PsycPRwf_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1578 
SymbolnrdB 
ID5205035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1940551 
End bp1941684 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content43% 
IMG OID640599800 
Productribonucleotide-diphosphate reductase subunit beta 
Protein accessionYP_001280469 
Protein GI148653376 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0185288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTACT CAATCTTTAG CCAAACAAAA AATGACGCGC TTAAAGAGCC GATGTTTTTT 
GGTCAGCCCG TTAACGTAGC ACGCTATGAC CAACAAAAGC ACCCCATCTT TGAACAACTT
ATCGAAAAGC AGTTGTCATT TTTCTGGCGT CCAGAAGAGG TTGATGTATC AAAAGACCGT
ATCGACTACG GCAACTTGTC CACGCATGAG CAGCATATTT TTATCAGTAA CCTAAAATAC
CAAACCTTGC TAGACTCCAT TCAAGGTCGT AGCCCAAACG TGGTGCTATT GCCGTTGGTA
TCTATCCCTG AGCTTGAGAC TTGGATTGAA ACATGGTCAT TCTCCGAGAC CATCCACTCA
CGCAGCTATA CCCATATTAT TCGTAATATC GTCAACGACC CTGCTGTGGT ATTCGATGAC
ATTATGGAAA ATGAGCACAT TCTACAGCGT GCTTCAGACA TTGCTTATTA TTATGATGAC
TTGTACCAAC ATTCACAGCT ATATAGCCTA TTTGGCCCAG GTACACACAT CGTCAATGGT
GAAGAAAAGT ATGTCGACTT ACGCAAACTA AAAAAACAGC TTTATCTGTG CTTGATGGCC
GTTAACGTAT TAGAGGCCAT TCGCTTCTAC GTATCATTCG CCTGCTCGTT TGCCTTTGCT
GAGCGCAAAC TGATGGAAGG TAACGCCAAG ATCATTAAGC TTATCGCCCG TGATGAAGCG
CTGCATTTAA CCAGTACCCA GCACATGATT AATATCATGG CGTCAGGCAA AGATGATCCT
GAAATGGCAG AGATTTCTGC ACAATGTCAT AACGAGAGTA TTGAGATTTT CCGAAAAGCG
GCTGAACAAG AAAAAGAATG GGCAGGTTAT CTGTTTAAAG ACGGCTCTAT GATTGGCCTA
AACAAAGACA TCCTATGCCA GTATGTCGAG TATATTACTA ACTTACGTAT GGAAGCGGTC
GGCTTACCGG GTATCTTCCC TGAATCTAAG AGCAACCCTA TTCCTTGGAT TAATACTTGG
TTGTCATCAG ATAACGTACA GGTAGCACCG CAAGAGACTG AAATCAGCTC CTACCTTGTC
GGCCAAATTG ACTCTGATTT ATCAGACAGT GACTTTGATG ACTTCGAGTT GTAA
 
Protein sequence
MTYSIFSQTK NDALKEPMFF GQPVNVARYD QQKHPIFEQL IEKQLSFFWR PEEVDVSKDR 
IDYGNLSTHE QHIFISNLKY QTLLDSIQGR SPNVVLLPLV SIPELETWIE TWSFSETIHS
RSYTHIIRNI VNDPAVVFDD IMENEHILQR ASDIAYYYDD LYQHSQLYSL FGPGTHIVNG
EEKYVDLRKL KKQLYLCLMA VNVLEAIRFY VSFACSFAFA ERKLMEGNAK IIKLIARDEA
LHLTSTQHMI NIMASGKDDP EMAEISAQCH NESIEIFRKA AEQEKEWAGY LFKDGSMIGL
NKDILCQYVE YITNLRMEAV GLPGIFPESK SNPIPWINTW LSSDNVQVAP QETEISSYLV
GQIDSDLSDS DFDDFEL