| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1574 |
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| Symbol | |
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| ID | 5204877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1932555 |
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| End bp | 1934672 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599796 |
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| Product | DNA primase |
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| Protein accession | YP_001280465 |
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| Protein GI | 148653372 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0270687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0108391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCC CTAACCACAT TCTTGATCAG CTCAATAGCC AAGCCGACTT GGTAGGGATT
ATTGGCAAAC ACACCACGCT TAAGCGCGCG GGAAAAGAGT TTAAGGGCAA TTGTCCTTTT
CATGGCGAAA AAACGCCCTC TTTTTATGTT AATCCCCAAA AAAATGTCTA TAACTGCTTT
GGCTGCGGTG TGAGTGGTAA TGCCATTAAG TTTTTGCGGG AATACGAAAA CCAAACCTTT
ATGGAGGCAG TACAAGAGCT GTCACGCCAG ACGGGTATAG AGATTCCCAA AGAAGACAAC
AAAGACTTGC GTTATAAACG CAGCGCCAAA CCCACGCCCA CGGCCCCTGC GCCCTCGTGG
ACTGGCAATG GCAAACGCTT AAATGACACG CACACTGCGG CGACGACACC GCATTCGGGC
CAAACTAATG GCTTAGCCAC TAATACGACA TCAGTGGCTG ATGCGCCCCC TGCTTATTTC
GATGAAGACA GCTATTTTAA TTTAGATTCA GCGCCGCCCA GTGATTGGGA TATGGGCGAC
ACACCTGGTG ATAACCTTGG TTATGACAGC GGCTTTACAG ATATGTCTTC CTCTAACTTT
GGTGGTCAAG CCACCATAGA GCAAGACGGC AACTTATATG AGCTACTGAT CCAAATTGGC
CAATTCTATC AAAACAATCT GCGTAATAAC CTGCACGCCA TGGCGTATTT TACAGAGCGG
GGATTAACCG ATGCCACCAT TAATGAATTT GGTCTGGGTT ATGCACCCAC CGGCTGGCAG
CATTTAGAAG AGGCCTTTCC GCAGGATATT GCAGGTCTAA AAGCTTTGGG TCTGGTGCGT
CAATCTGAAA AGGGTCGCGA CTATGATCTG CTGCGTGATC GGGTTATTTT TCCTATTCGC
GACAATCAAG GCCGGATTAT TGGCTTTGCC GGTCGGGCAT TAGACAACGA AGTTAAGCCC
AAATACATCA ACTCCAGTGA CTCCCCTGTC TTTCATAAGC AGCATGTACT CTACGGCTAT
TACGAGTCAC GTCAACAGCG AGCGAACGAT TGGCTGGTGG TTGAAGGCTA TATGGATGTC
ATTGCCTTAT ATCAAGCGGG TATCTATGGC GCAGTGGCCT CAATGGGTAC CTCGATTAAC
GAAACCCAAA TCGCCCGCTT ATTGCAAATG AACCCCACCT TAACCTTATG TTTTGATGGT
GACAGTGCCG GTCAAAAGGC CGCTTGGCGT ACGCTTGAGG TGGCCTTACC TGTGCTAAGC
GATGACAAAG AGCTGCGCTT TTTAACCCTA CCAGGTGGGC ATGACCCAGA CACTTACATT
GCCATGCAGG GTGTGGAGGC GATGCGAGAG CATATTAAGC GCGCCATGCC GTTATCGCAA
TACATTTTTG CTTATCTCAG CGAGCGCTAT GACTTAAGCT TAGCCGAAGG TAAAGCCAAG
CTGATGTCAC AAGTACGTCA GTTGACCAAT AATCTGCCCA AGGGTTCAAG CTTTAAGTAT
CTGCTTAATA ACGATATTTA TCAAAAGCTT GGCGGGCGCA AAAATCAAAA AAACTCCGCC
CATGATGTCT TATTAGACTT CGACAGCGAC ATGACGGTGA GCCGACAGCT CGAGTTGTGT
TTACTGTTTG CCCCACACTT ATTGGCAGAA GACCCCATCA AGCGACTGTG GGAGGTATCT
GGTGTGGCAG ATATTAAGAT ACCTGAAAAA TCGATAGGCA CACAGCAAGC ACCCGTAGCG
ACCCCACCTT TGCCAAGCTG GGAGGATTTT AATAGCCCAA GTCTTACCCA GCTGACTCAG
ACTATCATTG GTCTTACCCC TTATTTGCCT GAGGACACCA ATGCGGCCGC TCACTTTATT
TTGGCCAATT TGCCAAATGG CCTACAACAA AATCTTGCCA CCCGCTGGCA TCCATTTTGG
TCCAATCTCA ACCAGCGCGG GATTATTGAC GTAGATGATT TGGTAGATGA CTTGTTAACT
CAGCTGATGC TACAAGCCTT ATCAAAACAG ATGAGTCAGT CACCAGGGCT GGTGATTACC
AGCCATCTGA ACCGGCAGCG CCAGACCTTA ATGAACTGGC TTAAAAAGCA GCAAGCTGAG
CAGTCCTCCA AGATATAA
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| Protein sequence | MSIPNHILDQ LNSQADLVGI IGKHTTLKRA GKEFKGNCPF HGEKTPSFYV NPQKNVYNCF
GCGVSGNAIK FLREYENQTF MEAVQELSRQ TGIEIPKEDN KDLRYKRSAK PTPTAPAPSW
TGNGKRLNDT HTAATTPHSG QTNGLATNTT SVADAPPAYF DEDSYFNLDS APPSDWDMGD
TPGDNLGYDS GFTDMSSSNF GGQATIEQDG NLYELLIQIG QFYQNNLRNN LHAMAYFTER
GLTDATINEF GLGYAPTGWQ HLEEAFPQDI AGLKALGLVR QSEKGRDYDL LRDRVIFPIR
DNQGRIIGFA GRALDNEVKP KYINSSDSPV FHKQHVLYGY YESRQQRAND WLVVEGYMDV
IALYQAGIYG AVASMGTSIN ETQIARLLQM NPTLTLCFDG DSAGQKAAWR TLEVALPVLS
DDKELRFLTL PGGHDPDTYI AMQGVEAMRE HIKRAMPLSQ YIFAYLSERY DLSLAEGKAK
LMSQVRQLTN NLPKGSSFKY LLNNDIYQKL GGRKNQKNSA HDVLLDFDSD MTVSRQLELC
LLFAPHLLAE DPIKRLWEVS GVADIKIPEK SIGTQQAPVA TPPLPSWEDF NSPSLTQLTQ
TIIGLTPYLP EDTNAAAHFI LANLPNGLQQ NLATRWHPFW SNLNQRGIID VDDLVDDLLT
QLMLQALSKQ MSQSPGLVIT SHLNRQRQTL MNWLKKQQAE QSSKI
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