| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1571 |
|---|
| Symbol | |
|---|
| ID | 5204874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1928366 |
|---|
| End bp | 1929457 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640599793 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001280462 |
|---|
| Protein GI | 148653369 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1496] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0167434 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00710721 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTG AGAATACACC TAAGTGTGAG ACGATGCCTG ATGTGCAGCT CAGTGATGAG
CACAGCCTTG CTGCACCTTA TCAGGTATTG GCGCATACCA AAGCGGTTTT GGTATTGCAA
ACCGATGCCG GTGAGATTTT GACGCCCAAT CCAGAGGGAG TAAGCTTTGG TAACTTCAAT
TTAGGCCTGC ATGTGCAAGA TGATCCGCGT CAAGTACTAC GCAACCGGGC GCAGTTGCTA
CAGTATATCA ATGCCTATTT GCAGCAAAAT AGCTTGCAAG AAGATGACGT TGATAAAAGC
CTACAGGCAG TAAAAAGTAT CCATTGGCTC AATCAGATCC ACAGCAATAA AGTGTGCCGC
CTTGGCGATA AGCATGTAGA TTCAAGTGCC GCCTCGCTAT CATTAGTACC GGCTTCAGCC
GATGCCTTGG TAACAGATTT GCCGCAGCAA GCCTTGGCGA TTATGACGGC AGACTGCGTG
CCCATTGTCT TACATGATCC TACTACAGGG CAGATCGCAG CGATTCATGC CGGCTGGCAG
GGTCTGGCCA ATGGCGTCAT TGCCAAGACC TATGCCGCTT TATCACAGCA TGCCCTACAG
CATAAGGGTG AGGCGACACA GGTTAGTGGC GCAAGTGGTC GCTTAACGAT TCAAAAACCG
GCCATTGAGG CCTGGATAGG TGCTTGTATT GGTCAGTCTT GTTATGAAGT CTCCTCTGAG
GTGGTGGAAA AATTGCTTTT AGGCTGTGCT GAGCGCGGTA TGGATGCCAA GCAGCTTGAG
GTTATCAAAG CACAAATTGT GGCGCCGCAT GATGATCCGG ACAAAGCTTG GCTGGACTTA
CCAAAGCTTG CCCAATTGCA ATTGGCAGAG TTGGGTATTG CGCTGATCTC TGCCACCAAC
CAGCAAACTA ATTTAGACAT TAAGCCTGTC ATCGAAGCTG AGCGACATAT GTCTAAGGAC
GAGCAAAGCT ATACACCGAT TGCTTATGCG TGTAGTTATG CTAATCGTCA GTATTACTCT
TATCGGCGCA AGACCCATTT AAATGAGACG CATACTGGGC GTATGGCGCT GGTTATTGTG
CGTCTGCATT AG
|
|---|
| Protein sequence | MSLENTPKCE TMPDVQLSDE HSLAAPYQVL AHTKAVLVLQ TDAGEILTPN PEGVSFGNFN
LGLHVQDDPR QVLRNRAQLL QYINAYLQQN SLQEDDVDKS LQAVKSIHWL NQIHSNKVCR
LGDKHVDSSA ASLSLVPASA DALVTDLPQQ ALAIMTADCV PIVLHDPTTG QIAAIHAGWQ
GLANGVIAKT YAALSQHALQ HKGEATQVSG ASGRLTIQKP AIEAWIGACI GQSCYEVSSE
VVEKLLLGCA ERGMDAKQLE VIKAQIVAPH DDPDKAWLDL PKLAQLQLAE LGIALISATN
QQTNLDIKPV IEAERHMSKD EQSYTPIAYA CSYANRQYYS YRRKTHLNET HTGRMALVIV
RLH
|
|---|
| |