Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1559 |
Symbol | |
ID | 5204758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1911917 |
End bp | 1913146 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640599781 |
Product | glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) |
Protein accession | YP_001280450 |
Protein GI | 148653357 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000118644 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000049747 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTCTTCTT TTGCCGCACC AAGCTTAGAG CTGTCCGCTT CAAGCGCTTC TTTGTATCCT CTTACCCAGC CATCGCAGGA TGATACCGGC GAGTATCGGC CGCTGCGTGT TGCGATTAAT GGGTTTGGTC GTATTGGCCG TAATGTACTG CGCGCTTTAC TTGAGCGCTT TGAGGTACTG GGCAAATTGG TACACATTGT GGCCATCAAT GATGTGGCCG ATGTCGATAC ATTGCTGCAT TTATTACAAT TTGACAGCAC CCATGGCCGA TTAAGCCGAT TGGGGGTGAG TGCCAGTATC AAATCAATTG ATAAAAATAT TGATGTAAGC GGTGAGGCGC TGAGCGCTGA GGCCAATCAT CACGCCACTA ATATCAATAG CGCCCATTTA GCCAATCAGT TGTGTTTATC CAAAAACAAC ACCACGTATT GTATTGACCT CTTAAGTACC GAACAGCCGG AGCACTTGCC GTGGAACGCA CTGAGTGTGG ATGTGGTATT AGAGTGTACC GGTCATTTTC GATCGTATGA AGATGCCAGT CGCCATTTAA CTGCTGGCGC CAAGCAGGTC ATTGTGGGCG CTGCACCTTT TGATAAGGTC GATGCCAGTA TCGTGATGGG TGTCAATGAT GCTGAGCTGA CGCGTGATTT GCCCATTATC TCCAGTGTCT CTTGCACCAC TCAGGCGTTG GTACCGCTAA TTTATGTGCT AGATAAAGCC TTTGGTACGC AGTCGGTAAT GATGACTGAA ATCCATGCGG TCACGGCCGA TCAAAACGTA TTAGATCAGC CACATCGAGA CAAGCGTAGG GCGCGCGCTT CAGGGCACAA TATTATTCCT ACTACCTCAA GCAGCATTGC TGCCACCGAG CGCACTTTAC CGCATATGTT GGGCAAAATT AATGGTCATT CGATACGGGT ACCAACCATT GATGTCGCCG CTATTGATGT CAATTTAGTC TTTGATACAA GTGTCAGCTT AGAGGAGGTG AGAGCGGTGC TAAAAGCTGC GTGTGAGCCA GGCAGTAGCC TATATGGCAT TATGGGCTAT ACTGACCTAC CCTTAGTCTC CAGCGACTTT ATACATCAGG CTGAGTCACT GATCATAGAT GGCCAGCAGC TAATGCAAGT GGGGAGTCAG GTTAAGGTCT TTGCCTGGTA CGACAATGAG TGGGGTTATG CCAATCGCTT GTTAGACATG TGTTTGCATT TGCAGCAAGC ACGCCCGTAA
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Protein sequence | MSSFAAPSLE LSASSASLYP LTQPSQDDTG EYRPLRVAIN GFGRIGRNVL RALLERFEVL GKLVHIVAIN DVADVDTLLH LLQFDSTHGR LSRLGVSASI KSIDKNIDVS GEALSAEANH HATNINSAHL ANQLCLSKNN TTYCIDLLST EQPEHLPWNA LSVDVVLECT GHFRSYEDAS RHLTAGAKQV IVGAAPFDKV DASIVMGVND AELTRDLPII SSVSCTTQAL VPLIYVLDKA FGTQSVMMTE IHAVTADQNV LDQPHRDKRR ARASGHNIIP TTSSSIAATE RTLPHMLGKI NGHSIRVPTI DVAAIDVNLV FDTSVSLEEV RAVLKAACEP GSSLYGIMGY TDLPLVSSDF IHQAESLIID GQQLMQVGSQ VKVFAWYDNE WGYANRLLDM CLHLQQARP
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