Gene PsycPRwf_1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1555 
Symbol 
ID5205384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1907801 
End bp1908496 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content48% 
IMG OID640599773 
Producthypothetical protein 
Protein accessionYP_001280446 
Protein GI148653353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.040655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000302146 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAATTT TTCATCCTTT TTTAACATCG GCATCTAAGC CGCTACTGAG GGTAGTGCTG 
GTATCCGCTA TGGCAGCCGC TTCAGTGATA CCTGCTCAAG CTGAGCTCAT TATTAGTAGT
ACAGGTAGCA GTGCGGCCAA TCAAGGGGTC GTCACTCAGC CCGTTGACTC ACAAGCGCCG
CATGACGTGC AGCTTCAAAA GGTTCAGAGC AATCAGGTAC CCTCTGAGGC TTTAGTTATT
AAATTGATGC AAGTGATGCA CATTGATGAT CAAATCGATG CCATTGTGAA TGGTCAGCAA
GCTGCGAGAG ATATCCTAAA TAGCCAAGAA GATAAAGCGG CCAATGACAC AGCTGGTCTT
AATAAGCGTC AACGGGAATT GGCTGAAGGC TTACAAGGGA TATTGGCTCA GTATGGCAAA
GTCTTAGGGA CACGGATGAG CAGTACAGCC AGTCGTGAAG AGCTGACGGC TGCTTATATC
AGCGCTGCAC GAGCCCATTA CACCCAGCAA GAAGTACAGG CGCAAATTGG CTTTTATGAC
ACCCCAGTGG GTCAAAGCAT CTTGGCAAAA AATCCTAAGG TGAGTGCTGA TTTTCTGCAA
GCTGCCCTAC CCAGTGAGGA AGAGATGCAG CAAACGCGCG GTGAGCTAGA GCAGATGCTA
CCGCAGATCA AACAGATCTT TAAAGATGTC TTTTAA
 
Protein sequence
MSIFHPFLTS ASKPLLRVVL VSAMAAASVI PAQAELIISS TGSSAANQGV VTQPVDSQAP 
HDVQLQKVQS NQVPSEALVI KLMQVMHIDD QIDAIVNGQQ AARDILNSQE DKAANDTAGL
NKRQRELAEG LQGILAQYGK VLGTRMSSTA SREELTAAYI SAARAHYTQQ EVQAQIGFYD
TPVGQSILAK NPKVSADFLQ AALPSEEEMQ QTRGELEQML PQIKQIFKDV F