Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1555 |
Symbol | |
ID | 5205384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1907801 |
End bp | 1908496 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640599773 |
Product | hypothetical protein |
Protein accession | YP_001280446 |
Protein GI | 148653353 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.040655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000302146 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAATTT TTCATCCTTT TTTAACATCG GCATCTAAGC CGCTACTGAG GGTAGTGCTG GTATCCGCTA TGGCAGCCGC TTCAGTGATA CCTGCTCAAG CTGAGCTCAT TATTAGTAGT ACAGGTAGCA GTGCGGCCAA TCAAGGGGTC GTCACTCAGC CCGTTGACTC ACAAGCGCCG CATGACGTGC AGCTTCAAAA GGTTCAGAGC AATCAGGTAC CCTCTGAGGC TTTAGTTATT AAATTGATGC AAGTGATGCA CATTGATGAT CAAATCGATG CCATTGTGAA TGGTCAGCAA GCTGCGAGAG ATATCCTAAA TAGCCAAGAA GATAAAGCGG CCAATGACAC AGCTGGTCTT AATAAGCGTC AACGGGAATT GGCTGAAGGC TTACAAGGGA TATTGGCTCA GTATGGCAAA GTCTTAGGGA CACGGATGAG CAGTACAGCC AGTCGTGAAG AGCTGACGGC TGCTTATATC AGCGCTGCAC GAGCCCATTA CACCCAGCAA GAAGTACAGG CGCAAATTGG CTTTTATGAC ACCCCAGTGG GTCAAAGCAT CTTGGCAAAA AATCCTAAGG TGAGTGCTGA TTTTCTGCAA GCTGCCCTAC CCAGTGAGGA AGAGATGCAG CAAACGCGCG GTGAGCTAGA GCAGATGCTA CCGCAGATCA AACAGATCTT TAAAGATGTC TTTTAA
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Protein sequence | MSIFHPFLTS ASKPLLRVVL VSAMAAASVI PAQAELIISS TGSSAANQGV VTQPVDSQAP HDVQLQKVQS NQVPSEALVI KLMQVMHIDD QIDAIVNGQQ AARDILNSQE DKAANDTAGL NKRQRELAEG LQGILAQYGK VLGTRMSSTA SREELTAAYI SAARAHYTQQ EVQAQIGFYD TPVGQSILAK NPKVSADFLQ AALPSEEEMQ QTRGELEQML PQIKQIFKDV F
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