| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1554 |
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| Symbol | |
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| ID | 5205383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1905482 |
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| End bp | 1907599 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640599772 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_001280445 |
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| Protein GI | 148653352 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0904633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000233414 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGAATGC CTGAACCTAG ATCTTCACGT CAATTAAATC AATTGGCCAC TCAATTGCAA
GACGAAGCTG AGATTACAGG GGTTAATGCC TCCGGTACCC TGATTTCCAG CCGCGCTTTT
GAAATGGTAA CGGACTTTGA GCCTGCTGGC GATCAACCAC AAGCCATCGA AAAGCTGGTA
AAAGGGGTCG AGGCTGGCAT GGATGCCCAG TTATTGCTTG GGGTGACTGG CTCTGGTAAA
ACCTATACCA TGGCCAAAGT GATTAGTGAA ACACAGCGTC CAACCATTAT TATGGCGCAT
AATAAGACAT TGGCCGCCCA GTTATATGGA GAGTTTAAGT CCTTTTTCCC TAATAATGCC
GTAGAGTATT TCGTCAGTTA CTATGATTAC TATCAGCCTG AGGCATATGT CGCAGCCAGT
GATACCTTCA TTGAAAAAGA CAGTGCCATT AATGATCACA TTGACCAAAT GCGACTGTCT
GCGACTCGCG CTTTACTAGA GCGCCGTGAT GCGATAATTA TCTCTTCAGT GTCCTCCATT
TATGGTTTGG GTGACCCAGA GAGTTATTTA AAAATGCTGT TGCACATTGT TGTGGGTGAT
GTGGTAGACC GCAATGCCTT AATTAAGCGA TTGGTTGCGC TGCAATATAC CCGTAATGAG
CTTGATTTTG AGCGGGGTAC TTACCGCTTA CGTGGCGAGC TTTTGGATAT CTACCCTGCA
GAATCTGAGC AATTGGCAGT GCGTATTAGT ATGTTCGATG ATGAGGTTGA AAAAATCAGT
TGGTTTGATC CATTAACGGG TAAGACTGTA CGTAGTGTGC CGCGCATTAC CATTTATCCA
AAATCTCACT ATGTGACGCC GCGTGAAAAA CTAGAGGCCG CCAGTAAGAC CATTCGAGCC
GAGCTTGATG ACAGATTGGA ATATTTTAGA GCCAATGACA AGTTAATTGA AGCTCAGCGG
ATTAAAGAGC GCACCCAGTA CGATCTAGAG ATGATACAGC AGCTGGGCTA CTGTAACGGC
ATTGAGAACT ACTCGCAGCA TCTATCGGGT CGTCCTGCCG GCGAAGCGCC ACCTACCTTG
TTTGATTATA TTCCTCCAGA TGCGCTACTT TTCATCGATG AATCACATGT CACCGTGCCC
CAAATCGGAG CCATGTATAA AGGTGACCGT TCTCGTAAAG AGAACTTGGT GAATTATGGT
TTTCGCTTGC CCAGTGCCAT GGACAATCGT CCAATGAAAT TTGAAGAGTG GGAAAGAATT
AAACCGGCAA CAATTTTTGT GTCAGCAACG CCTGCGCAAT ATGAGCTTGA AAACAGTGAA
CAAATTGTAG AGCAGGTAGT GCGTCCAACC GGTCTTATTG ATCCTGAGAT TGAGATTCGA
CCTGTATTAA CCCAAGTTGA TGATGTGTTA TCAGAGATTA CCAAGCGCCG TGACGTCAAT
GAGCGGGTGC TAATTACCAC CTTGACCAAG CGTATGTCAG AAGATTTAAC CGATTATCTA
AAAGAGTATG ATGTCAAAGT GGCTTATCTG CATTCTGATA TTGATACTGT GGAGCGGATG
CAAATTATCC ATGAGCTGCG TACCGGTGTG CATGATGTGT TGGTCGGTAT TAACCTGCTA
CGCGAGGGTC TAGATATGCC TGAGGTGTCA CTGGTGGCCA TATTTGATGC CGATAAAGAG
GGGTTTTTGC GCTCAGAGCG CTCGTTGATT CAGACCATTG GCCGGGCAGC TCGTAATTTA
AACGGTAAGG CTATTTTATA TGCCGATAAA ATTACGCCCA GTATGCAAAA GGCGATTGAA
GAGACAGATC GTCGCCGCGA AAAACAAATT GCCTTTAACA AAGAGCATGG CATTACGCCT
AAATCTGCCA CCCGTAGTAT TACCGATAAG ATTGATACTG GTGAAGTAGA GGAGGATGTA
AATGACAATC AGCCAATTCC AAGTAGCAGT GGCTTGCCGG ATGTGGATAT TGAAATCTTA
CGTAGTCCAG ACTTGCTGGC CAAAGAGATT AATCGGTTAG AGAAGCAGAT GAAACAATTC
TCCCGTGAGC TTAAGTTTGA GGATGCTGCA AAAGTACGTG ATAAGGTGCT GGCGCTTCGG
GCTTATATTG TTCAGTAA
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| Protein sequence | MRMPEPRSSR QLNQLATQLQ DEAEITGVNA SGTLISSRAF EMVTDFEPAG DQPQAIEKLV
KGVEAGMDAQ LLLGVTGSGK TYTMAKVISE TQRPTIIMAH NKTLAAQLYG EFKSFFPNNA
VEYFVSYYDY YQPEAYVAAS DTFIEKDSAI NDHIDQMRLS ATRALLERRD AIIISSVSSI
YGLGDPESYL KMLLHIVVGD VVDRNALIKR LVALQYTRNE LDFERGTYRL RGELLDIYPA
ESEQLAVRIS MFDDEVEKIS WFDPLTGKTV RSVPRITIYP KSHYVTPREK LEAASKTIRA
ELDDRLEYFR ANDKLIEAQR IKERTQYDLE MIQQLGYCNG IENYSQHLSG RPAGEAPPTL
FDYIPPDALL FIDESHVTVP QIGAMYKGDR SRKENLVNYG FRLPSAMDNR PMKFEEWERI
KPATIFVSAT PAQYELENSE QIVEQVVRPT GLIDPEIEIR PVLTQVDDVL SEITKRRDVN
ERVLITTLTK RMSEDLTDYL KEYDVKVAYL HSDIDTVERM QIIHELRTGV HDVLVGINLL
REGLDMPEVS LVAIFDADKE GFLRSERSLI QTIGRAARNL NGKAILYADK ITPSMQKAIE
ETDRRREKQI AFNKEHGITP KSATRSITDK IDTGEVEEDV NDNQPIPSSS GLPDVDIEIL
RSPDLLAKEI NRLEKQMKQF SRELKFEDAA KVRDKVLALR AYIVQ
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