| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1538 |
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| Symbol | |
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| ID | 5205440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1881491 |
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| End bp | 1883491 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640599756 |
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| Product | transketolase |
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| Protein accession | YP_001280429 |
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| Protein GI | 148653336 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0168278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACAC CTATATCTGA ACGCAAACTA GCTAACGCCA TTCGTGTGCT TTCTTTTGAT
GCGGTTCAAA AAGCCAACTC AGGGCATCCG GGCGCACCGA TGGGCATGGC AGATATTGCA
GAAGTATTGT GGCGTAAATT TTTAAAGCAC AACCCAACCG ATCCAAATTG GCCAAACCGT
GACCGCTTCG TGTTATCAAA TGGTCATGGC TCAATGTTGA TTTACTCGCT ACTGCATTTA
ACGGGTTATG ACGTTAGCAT TGATGATTTA AAAAACTTCC GTCAGTTGCA TTCAAAAACC
CCAGGTCACC CAGAGTTTGG CTATACGCCA GGTGTTGAAA CCACGACCGG TCCATTGGGT
CAAGGTATTG CCAATGCTGT GGGCTTTGCT ATTGCCGAAA AAACATTGGC CGCTCAGTTC
AACCGTGACG GTCACAACAT CATTGATCAC CATACCTATG CATTCTTAGG CGATGGCTGT
CTGATGGAAG GCATTAGCCA TGAAGTGGCC TCACTTGCTG GCACTTTGGG CTTGGGCAAG
TTGGTATTCT TCTATGATGA CAACGGCATC TCAATTGATG GTAACGTAGA AGGCTGGTTC
ACTGACGATA CGCAAATGCG CTTTGAAAGC TATGGCTGGC AAGTGATTAA GGTTGATGGC
CATGACGCGG ATGCTATTAC CAAAGCCACG GAACAAGCGA TTGCTGAAAC CAGTAAACCC
AGCTTAATCA TCTGTAAAAC CATTATTGGT GTGGGTAGCC CCAACAAACA AGGCAAAGCC
TCAAGCCATG GCGCGCCACT GGGCGATGAT GAAATCGTAT TGGCTCGTGG CGAGCTTGCT
TGGGCACACG CTCCTTTTGA AATCGATGAA GAAGTGTATC AAGCTTGGGA TGCTAAAGCC
AAAGGTGAGG CTCAGCAGAA AAACTGGGAA GCGGATTTTG AAGCCTATAA AAAAGCCTAT
CCAGAGCTTG CTGAGGAGCT ACAACGTCGT CTAAGCGGTG ACTTGCCAAG TGACTTTGAG
CAAAAAGCCA AAGCATACAT CCAGCAGTGC CAAGATCAGG GTGAAAACGT CGCCAGCCGT
AAAGCCAGCT TCAATGCTAT TAATGCCTTC CAGCCACTAC TGCCAGAGAT TATGGGGGGA
TCAGCAGACT TAGCAGGGTC TAACTTGACT TTGTTCAAAG ATGCTAAAGG TATTGAAACT
GATGCTGATG GTAACTACAT CTATTACGGC GTGCGTGAAT TTGGTATGAC CGCGATTGCT
AACGGTATTG CGTTACACGG CGGCTTTATT CCTTACGTTG CTACTTTCTT AATGTTTATG
GAATATGCCC GCAATGCGGT ACGTATGGGC GCGTTAATGA AACAGCGTGT TATCCATGTG
TATACGCATG ACTCAATCGG TCTGGGTGAA GATGGTCCTA CGCATCAGCC TGTGGAGCAG
TTGACCAGCC TACGCACCAC ACCAAATCTG CATACATGGC GTCCTTGTGA TACCGCAGAG
TCGGCCACGG CCTGGGCAGA AGCACTAAAA GCTAAGAACA ACCCATCTGC GCTGATCTTT
AGCCGCCAAA ACTTGCCGCA CCAAGCACGC GATAGCGAGC AAGTGGCCAA TATTGCTAAA
GGGGGTTACG TGCTGGCCAA AGAGCAGTCT GAGCTTCAGG CCATTATCAT TGCGACAGGC
TCAGAGGTGA GCTTAGCGAT GGACGCATAC CAGACATTAA CGGCAAACGG TGTGGGTGTG
CGCGTGGTGT CTATGCCTTG TGCTGAAGTA TTCACTGCGC AAGACAGCGA CTATCGTGAG
GCAGTATTAC CATCAAGCAT TCGTGCTCGC GTTGCGGTAG AAGCTGCACA CGTGGACTAT
TGGTTTAAGT TTGTGGGTCT TGATGGTAAA GTGATTGGCA TGACCACTTA TGGTGAGTCA
GCCCCTGCAG GCGAGCTGTA CAAAGAGTTC GGTATCACTA CTGAAGCTGT GGTAGAGGCG
GTAAACAGCT TAGTTAAATA A
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| Protein sequence | MSTPISERKL ANAIRVLSFD AVQKANSGHP GAPMGMADIA EVLWRKFLKH NPTDPNWPNR
DRFVLSNGHG SMLIYSLLHL TGYDVSIDDL KNFRQLHSKT PGHPEFGYTP GVETTTGPLG
QGIANAVGFA IAEKTLAAQF NRDGHNIIDH HTYAFLGDGC LMEGISHEVA SLAGTLGLGK
LVFFYDDNGI SIDGNVEGWF TDDTQMRFES YGWQVIKVDG HDADAITKAT EQAIAETSKP
SLIICKTIIG VGSPNKQGKA SSHGAPLGDD EIVLARGELA WAHAPFEIDE EVYQAWDAKA
KGEAQQKNWE ADFEAYKKAY PELAEELQRR LSGDLPSDFE QKAKAYIQQC QDQGENVASR
KASFNAINAF QPLLPEIMGG SADLAGSNLT LFKDAKGIET DADGNYIYYG VREFGMTAIA
NGIALHGGFI PYVATFLMFM EYARNAVRMG ALMKQRVIHV YTHDSIGLGE DGPTHQPVEQ
LTSLRTTPNL HTWRPCDTAE SATAWAEALK AKNNPSALIF SRQNLPHQAR DSEQVANIAK
GGYVLAKEQS ELQAIIIATG SEVSLAMDAY QTLTANGVGV RVVSMPCAEV FTAQDSDYRE
AVLPSSIRAR VAVEAAHVDY WFKFVGLDGK VIGMTTYGES APAGELYKEF GITTEAVVEA
VNSLVK
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