Gene PsycPRwf_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1537 
Symbol 
ID5205439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1880460 
End bp1881407 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content48% 
IMG OID640599755 
Productregulatory protein, IclR 
Protein accessionYP_001280428 
Protein GI148653335 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACC CCAAAAAGCA ACCAAATGGC TTAGATATAG CTGCTGCCTC AGATCAGTCT 
GGCAGCGATC ATGACCCACG CTTTTATAAA GAAACAGTAT CTAATAAAGA CATAGCATCT
TTGCCGACCC TAAAACCATC AGCAAATATT GGTCTACTTG ACAGCCTCAG CCGCAGTTTA
GAGCATGCCA AAATAACGGA TGACAAGGCC TTTATTACAG CACTTGGACG AGGACTGCTG
TTGCTAAGTG CCTTTGAAGA TGAGCAAGAG CTGACCCATC AGAGGCTGTG TGATAAGACT
GCTTTGCCTA AAGCCACTGT CAGCCGCCTA TTGCATACGT TGCAGCAGTT AAACTTTATC
AAGCGTAATA GCAATGACAG CTATAAGCTT GGCAAAAACC TGCTCAAATT AAGCAGCAGT
GTCTGGCAAG GGCAAGATAT CGTTGAAGAG GCGATGCCGT TACTGCGAGA GTTTGCACTC
ACTCATCAGG TATCGGTCAA TATTGCGACC GAAGATGAGG GCGAGATGCG TTATGTGGCG
TGTTATCGCA GTCCAGCACG ATTGGCGGTG AATCTTTCAG TGGGGTCAAC GGTGCCACTT
GAGAAGACGG CTTTAGGGCG GGCTTATTAT GCTGCGATGA CGCCATCTAT GCAGCAGCAA
GTGATAGATA CTCTGCCCTA TGCTGATGAC TCTGAGCAAC AGCTTGTGGC AATAAATAGG
CTTAATCAGG CAGCTGATTT TTATCACCAG CACGGCTACA GCTTGTCCGA TGGGGAGTAT
TCACCCGATA TCTTGGCAGT GGCAATGCCG CTATACGACA GCATTCAGGG TAAATACACT
CACGCCTTAA ATGCCAGTGT TCCAAGGGCG CTGTGGGAGG CCGACAGCTA TATCAGTTAT
ATTGTGCCGC ACCTACAGGC TTTGGCCAAA CAGATTGAGT CATTGTAA
 
Protein sequence
MTHPKKQPNG LDIAAASDQS GSDHDPRFYK ETVSNKDIAS LPTLKPSANI GLLDSLSRSL 
EHAKITDDKA FITALGRGLL LLSAFEDEQE LTHQRLCDKT ALPKATVSRL LHTLQQLNFI
KRNSNDSYKL GKNLLKLSSS VWQGQDIVEE AMPLLREFAL THQVSVNIAT EDEGEMRYVA
CYRSPARLAV NLSVGSTVPL EKTALGRAYY AAMTPSMQQQ VIDTLPYADD SEQQLVAINR
LNQAADFYHQ HGYSLSDGEY SPDILAVAMP LYDSIQGKYT HALNASVPRA LWEADSYISY
IVPHLQALAK QIESL