Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1526 |
Symbol | |
ID | 5206356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1865892 |
End bp | 1867526 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640599744 |
Product | extracellular solute-binding protein |
Protein accession | YP_001280417 |
Protein GI | 148653324 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATACC CTATTTTTAA GCTTAGCCTA TTAGCCGCAG CAACCATTGG TATCACCGCT TGTGGCGGTG GTGGTGATAA AGCGGCCTCA TCTGCCGGTG CTGCTGAAGG CGGCAAGACT TTAATCTACT GCTCTGAGGG TAGCCCTGCA GGCTTCGACC CTGCTCAATA TACTGCCGGC ACCGATTTTG ATGCCAGTGC CTATCCTATC TACAATGGCT TGGTTGAATT CAAACGTGGT GAAACAGAGA TTCAACCTGC TCTAGCAGAA AAATGGGACA TCAGTGAAGA CGGAAAAACC TACACCCTAC ATCTACGTAA AGGGGTTAAA TTTGGTAAGA CTGACTTCTT CACCCCTACC CGTGACTTCA ATGCTGACGA TGTGGTATTT ACCCTAAAGC GTCTGACTGA CCCTAATTTT GAATTTAATA AAGCATACCC AGCTGAATTT CCTTATTCAG TCGACATGGG CCTTCCTGAT AACATTGCCA ATATCGAAAA AATTGACGAC TACACGGTAA AAATCACCTT AAAAGAAGTG AACGCGCCTT TCTTACAAAA CCTTGCCATG CCGTTTGCTT ATATTGACTC TGCTGAATAT GCGCAGTCTT TAATGGATGC AGGTAAAGCA GCTGACTTAA ATACCAAACC TGTGGGCACC GGTCCGTTTA TCTTCAATTC ATACCAAAAA GACTCACAAA TTCGCTATAC CAAAAACCCA GATTATTGGA ATAAAGACGA CATTCACATT GATAACCTAG TTTTCGTTAT CACCAAAGAT TCAGCCGTAC GTGCTCAAAA AGTACAAGCG GGTGAGTGTC ATGTTTCCGC CTATGCCAAC CCCTCTGAGG TTGAGTCTGC TAAAGCCTCA GGTAAAGCAA AAGTACTAGA AGAGCCAGGC TTTAACGTAG GTTATATTGC CTATAACACA GAGCGACCTG AGCTAAAAGA TCCTAAAGTA CGTGCGGCGC TTGATATGGC AATCAATAAA GACGCACTAA TCGATGCTGT TTATCAAGGT GCTGGCGTAA AAACAGCCAA TCCGATGCCA CCTACTCAGT GGGGCTTTAA CGATCAGCTA AAAGATGCCC CTTATGACAC CGAAAAAGCC AAAGCATTAA TGGCAGAAGC AGGTGTTAAA GGCTTTGATA TTGATCTGTG GTATATGCCT GTTCAACGTC CTTATAACCC CAACGCTAAG CTGATGGCCG AAATGCTTCA AGCTGACTGG GCAAAAATTG GGGTCAAAGC CAATTTAAAA ACCTTTGAAT GGGGCGAGTA CTTAAAGCGT GCCAACAAAG GGGAACACGA CATTATCCTA GCTGGCTGGA CGGGCGACAA TGGTGACCCT GATAACTGGT TGGGCGTCTT ATTATCTTGT GATGCCGTCA ATGGCAATAA CTATGCCCGC TGGTGTAACA AAGACTTTGA TAAGCTGATT ATGGATGCCC GCTCTAACAC CAACCAAGAA GAGCGCATTG CTAATTACAA ACAAGCTCAG GAGATTTTCA AGCAAGATCT ACCCTGGACC ACAGTGGCCA ACTCAGTAGT AACGGTGTTA ACCACACCGA ATGTGAAGGA TTATAAAATC AGTCCTTTAG GCTCAATTCG TTTTGATGGT GTGGATGTCG AATAA
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Protein sequence | MKYPIFKLSL LAAATIGITA CGGGGDKAAS SAGAAEGGKT LIYCSEGSPA GFDPAQYTAG TDFDASAYPI YNGLVEFKRG ETEIQPALAE KWDISEDGKT YTLHLRKGVK FGKTDFFTPT RDFNADDVVF TLKRLTDPNF EFNKAYPAEF PYSVDMGLPD NIANIEKIDD YTVKITLKEV NAPFLQNLAM PFAYIDSAEY AQSLMDAGKA ADLNTKPVGT GPFIFNSYQK DSQIRYTKNP DYWNKDDIHI DNLVFVITKD SAVRAQKVQA GECHVSAYAN PSEVESAKAS GKAKVLEEPG FNVGYIAYNT ERPELKDPKV RAALDMAINK DALIDAVYQG AGVKTANPMP PTQWGFNDQL KDAPYDTEKA KALMAEAGVK GFDIDLWYMP VQRPYNPNAK LMAEMLQADW AKIGVKANLK TFEWGEYLKR ANKGEHDIIL AGWTGDNGDP DNWLGVLLSC DAVNGNNYAR WCNKDFDKLI MDARSNTNQE ERIANYKQAQ EIFKQDLPWT TVANSVVTVL TTPNVKDYKI SPLGSIRFDG VDVE
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