Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1525 |
Symbol | |
ID | 5206355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1865037 |
End bp | 1865738 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640599743 |
Product | IS1 transposase |
Protein accession | YP_001280416 |
Protein GI | 148653323 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1662] Transposase and inactivated derivatives, IS1 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATCA CACTATACAT CAAATGCCCA GCCTGTCTAA GTGACAATAT AAAGAAAAAT GGCTTCAAAA GCTATGGTAA ACAAAACTAT AAATGCAAAG ACTGCAAACG GCAGTTTATT GGAGACCATG CCTTAACGTA CCAAGGATGT CACTCCCAAA AAGATAGCAA AATACGATAT CTTATGGTTC GAGGCAGTGG CATAAAAGAC ATCGCTTGCG TTGAGAGAAT CAGCAAAGGC AAAGTACTAG CCACCCTAAA AAAGTGTCAC TACCCAATAA CCCCCAAGCA AAGGCAATAC GACTGTCTTG AAATTGATGA GCTTTGGACA TTCGTAGGTA AAAAAACCAA CAAACAATGG CTAATTTATG CCTATCACCG TGACACAGGT GAAATTGTTG CCTATGTGTG GGGAAAACGA GACCTTAACA CTGTCAAAAA GCTTAAAGCT AAGCTGAAAG CCCTAGGCGT AAGTTGTGCT AGAATCGCTA GTGATACCTG GGATAGCTTT GTTACTGGTT TTAAGGGCTT TACCCAAGTC ATTGGCAAGT TTTTCACGGT CGGCATTGAA GGTAATAATT GCACTATCAG ACATCGAGTA AGGCGAGCAT TTAGGCGAAG TTGTAACTTT TCTAAAAAAC TGGAAAATCA CTTTAAAGCC TTTGATTTAG CTTTCTTTTA CATCAATCAT GGGTATGTTT AA
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Protein sequence | MHITLYIKCP ACLSDNIKKN GFKSYGKQNY KCKDCKRQFI GDHALTYQGC HSQKDSKIRY LMVRGSGIKD IACVERISKG KVLATLKKCH YPITPKQRQY DCLEIDELWT FVGKKTNKQW LIYAYHRDTG EIVAYVWGKR DLNTVKKLKA KLKALGVSCA RIASDTWDSF VTGFKGFTQV IGKFFTVGIE GNNCTIRHRV RRAFRRSCNF SKKLENHFKA FDLAFFYINH GYV
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