| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1519 |
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| Symbol | |
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| ID | 5206271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1854520 |
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| End bp | 1856553 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640599739 |
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| Product | TonB-dependent heme/hemoglobin receptor family protein |
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| Protein accession | YP_001280412 |
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| Protein GI | 148653319 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACCT CATCTTCTAA TCGTTTATCT CCGTTATGTT TAGCAGTTGC TTCAGCGCTT
GTTGCTCAAG TAGCTAGCGC TCAGACTGAC ACGCCACGTA TGACGGCTCA AACTATCACA
GTAACAGCCA ACAGCTCAGC CCGTGATAGA GCTCAGAATG ATTCGTTATA TACTGAAGAG
TACACACCTG CTCAGCAAGC TTCCCATTTA AGTGACTTCT TAGAAGTTGT GCCTGGTGTG
AGCGTCGGTG GTACCTCATC TGTTAACCAA CGTATTCGTG TGCGTGGCTT GGATGATACC
AATCTAAAAG TATCCATTGA TGGGGCACGT CAAGAAGGTG CTTTGTTTTA CCACATGGGT
GATGTAACCA TTGACCCAGA CCTGTTAAAG CAAACCGAGG TGGCTGTGGG TAATAACTCA
GTAACCTTAG GTAATGATGC CTTAGGCGGT GCAGTAGCCT TTAAAACAGT AGATGCTGCT
GACTTACTAA AACCAGGCCA AAAAATCGGT GCCAAGCTGC ATGCAGGTTA TGCCAGCAAT
AACGATGAGG TATTAACTTC AGCGACTGTC TTTGCTGCTC CAGCTGAAAA TGTGGATTTG
TTGGCTTACT ATGGTAAGCG AGACGTGGAA TCTGGTGAAG ATGGCGACGG CCGTGAGCTA
TTTGAGGACA GTAAAGGCGA AAATATTTTA TTAAAAGCGG GCGCTACTAT CGCTGATGAT
CATCGTATTG GTGCGAGCTT TAGTCGTACT GAGAAGAAAG GTATTTTTCC ATTTCGCCCA
GATTTTCCTT CAAGACCTGA AGATCCTATT CCACAGCAAG TTAAGCGTGA CACTTACAAT
GTAGATTATG GCTTTAATCC TGCCAACCCA CTTATTGACG TTTCTGCCAA TGCTTATCAA
ACCAAGACCC AGATTTTACG TGATTCAGAT GGCAAAGCCG GTTATGAGTT CGATGCGGAA
GTAAAAACGA CAGGCGCTAA AGTTGAAAAT ATTAGTATGA TTGAGAGCCG TATTGGCAAT
CATAAGCTAA TCGCTGGTGT GGAGCATTAC AAAAAAGAAT CAGCAATGAG CCGTGACTTT
GCTAAGGCAA GCAATGATGA GGCCAAAAAT ACTTCCGTAT ATTTAGAAGA TCAATGGCAC
TTGGACAAAC TTACCTTAAC GCCTGGTGTT CGTTATGATC GTTATGAGTC ACCCAAATTT
GTATCAGATG GCAAAACCTA TAATAATGTA GTAGGTGCTC TAGCAGCCAG CTATGAAATC
GCTCCAAACA CACAAGTATT TGCAAGCTAT ACTCAACTGT TTAATGGCCC AGACCTAAGC
CAGACTATCT TTAACTCAGA TGGCGCAAAT ACCTTTGTAA ATAGAGGTCT TAAGCCAGAA
GAAGGGGATA ACTCAGAGGT GGGTATTAGC ACCGTATTAC GCGGTCTAAC TTTAGACAAT
GATGCGCTGC AATTAAGTGC CAAGTACTTT AAGACCAATG TCGAAAACTA TCTACAGTTC
GTACGTACAG GTGGTGGGCG TGAGGGTCTA GACTGTAACA CAGGTAGACC AGGCGGCAAT
TGTCAGGGTT CTGTGAACTC TGATGAAGAC TATGAAATCA AAGGGGTAGA GTTAGCAGCT
AACTACACCA CTAATAATTT TGGTATGGAG CTAAGCTACT CTCGCGCTCG TAGTGAAGGT
GATAAAACAG GTAATAGCAT TCCTTCTGTC AGTGGCGGCA CTGCAGACTC AGGTGACCGT
TACATGGTTA ACTTAAATTA TGATCCCACT AACGAGCTGG GTCTAGGCTG GCGCAGCACC
TATGTGGCTT CAATTACGGA TAATAACGGC ATTACTAAGC CAAGCTACGA TGTCCATGAT
GTCTATATGA GTTATGCACC TCGTCAGTTT AAAGATATAA AAGCCACGCT TGGTGTCTAT
AATATCTTTG ATGAGACCTA TGCCAATCAC TCTTCACGCT TAAGTGACAG CGATGCAGCA
ACTGACTTTG AGCCAGGTCG TAATATCAAG GCCTCTTTAA CCTACCAGTT CTAA
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| Protein sequence | MRTSSSNRLS PLCLAVASAL VAQVASAQTD TPRMTAQTIT VTANSSARDR AQNDSLYTEE
YTPAQQASHL SDFLEVVPGV SVGGTSSVNQ RIRVRGLDDT NLKVSIDGAR QEGALFYHMG
DVTIDPDLLK QTEVAVGNNS VTLGNDALGG AVAFKTVDAA DLLKPGQKIG AKLHAGYASN
NDEVLTSATV FAAPAENVDL LAYYGKRDVE SGEDGDGREL FEDSKGENIL LKAGATIADD
HRIGASFSRT EKKGIFPFRP DFPSRPEDPI PQQVKRDTYN VDYGFNPANP LIDVSANAYQ
TKTQILRDSD GKAGYEFDAE VKTTGAKVEN ISMIESRIGN HKLIAGVEHY KKESAMSRDF
AKASNDEAKN TSVYLEDQWH LDKLTLTPGV RYDRYESPKF VSDGKTYNNV VGALAASYEI
APNTQVFASY TQLFNGPDLS QTIFNSDGAN TFVNRGLKPE EGDNSEVGIS TVLRGLTLDN
DALQLSAKYF KTNVENYLQF VRTGGGREGL DCNTGRPGGN CQGSVNSDED YEIKGVELAA
NYTTNNFGME LSYSRARSEG DKTGNSIPSV SGGTADSGDR YMVNLNYDPT NELGLGWRST
YVASITDNNG ITKPSYDVHD VYMSYAPRQF KDIKATLGVY NIFDETYANH SSRLSDSDAA
TDFEPGRNIK ASLTYQF
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