Gene PsycPRwf_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1514 
Symbol 
ID5206266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1849158 
End bp1850153 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content51% 
IMG OID640599734 
ProductTonB family protein 
Protein accessionYP_001280407 
Protein GI148653314 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATA AAACCAGCTC TAGCCCAGTT AAAGTTAATA CTGCCACGAT TATTGCTGTG 
TTGGCGCTGC ATATGGGGGT GGCTGCAGCA TTAGTGGCAT TAGATATGCC AAAACCCATG
CCAAAAAAGC CAGAGATTGA AAAGCCGATT GAAATTGAGC TATTAACCTT AGCTGAGCAG
CCAGAGCCAG AGGTAGTGGA GGTTGCACCG CAGCCAGTCG TCACCCCGCC ACCGCAGCAG
CCTGTCTCAA AACCTGAGTC ACCAAAGCCT GCCCCGGTAA AAAAAGTTGA GCCCAAACCT
GAGCCAGCCA AAGTTACCAA GCCCGAACCA AAGCCCGAAC CAAAACCTGT CGAAAAGATT
AAAACGCAGC CTGAGCCAAA ACCTGAGCCA AAACCTGAGC CAAAAATAGA AAAGACCCCC
ATCGTTAAGC CTGATCCTAA GCCAGTCATT GATAACACTG AGCAGCAACG TCTTATTGAC
AAGGCCGCTA CTGAAAGAGC TGCTGCTGAA AAGGCTGCCG CTGAAAGGGC CGCTGCTGAA
AGAGCTGCTG CTGAAAAGGC CGCTGCTGAA AAGGCCGCTG CTGAAAGGGC CGCTGCTGAA
AGGGCCGCTG CTGAAAAGGC GGCGGCTGAA AAGGCGGCTG CTGAAAGGGC CGCTGCTGAA
AGAGCTGCTG CTGAAAAGGC GGCTGCCGCT GCCAGTAATA CTCCGCAGAA CTTCTCTGCC
AATCAGGCCA GCTGGAGAAG CAAACCAAAC TTTTCTATTC CGCCTGCGGT AGTTAGAAGG
CTAAATCCAG GAGACAGACT GCGGGTTATG GTCAGATTAA CGGTAGATAA GAGCGGCACG
GTAACAAGCG CCACCTTAGC CAAGTCTTCA GGCAACACCG CGCTAGATAA TTACACCGTC
AATACCGCAA AAAAAGGTAA ATTTAATCCT TTCACTAAAG GCGGTCAGCC TGTGGTCGGG
GTGGTGACAC TGCCCATAGA TTATCAGGTT AACTAG
 
Protein sequence
MNNKTSSSPV KVNTATIIAV LALHMGVAAA LVALDMPKPM PKKPEIEKPI EIELLTLAEQ 
PEPEVVEVAP QPVVTPPPQQ PVSKPESPKP APVKKVEPKP EPAKVTKPEP KPEPKPVEKI
KTQPEPKPEP KPEPKIEKTP IVKPDPKPVI DNTEQQRLID KAATERAAAE KAAAERAAAE
RAAAEKAAAE KAAAERAAAE RAAAEKAAAE KAAAERAAAE RAAAEKAAAA ASNTPQNFSA
NQASWRSKPN FSIPPAVVRR LNPGDRLRVM VRLTVDKSGT VTSATLAKSS GNTALDNYTV
NTAKKGKFNP FTKGGQPVVG VVTLPIDYQV N