Gene PsycPRwf_1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1509 
Symbol 
ID5205679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1844304 
End bp1845281 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content51% 
IMG OID640599729 
Producttransport system permease protein 
Protein accessionYP_001280402 
Protein GI148653309 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATT TTGTGCACCC ACATAAGCGA TTCTTGTCTA CAACCGTAAT CAGCTATGGC 
GCTGCTGTCT TGGTATCTGC CCTATTGATT TGGTTGAGCT TGGGCGTGGG ATTTGGTCAG
TGGTCTAGCC CCTCACAACT TGATGCCACC TTATGGCAGC TGCGCTATCC TCGGGTAGTC
ACCGCCTTAT TGGTGGGCTT AGCACTATCA GTGAGTGGCG CTGCACTACA AGCTTTATTC
GAAAATCCAT TGGCCGATCC GAGCTTAATT GGTACCTCTG GTGGCGCAGC CTTAGGGGTG
GTATTGATAC TGGCTCTGGG CATCTCTGGC ATTGGGGTGC CACTGGCCGC CTTCATAGGC
AGCTTAGTGG TATGTCTGTT GGTGCTGGGT TGTCACCGAT TTTTGGGTGG TGGTCAGATG
GGGCTGCTTA TCTTAGGCTT TGTGATCAGC GCCTTTTGTG GCGCTTTGGT GAGTTTAATT
TTGTTTTTGT CCAATGACAT GGTGCTGCGC AGTGCCACCA ATTGGCTGGC AGGTAGTATG
GCTGAGGCAG GCTTTGTACC ACTGCGCTAT GCCTTGATAA GCATTGCTTT GGGATTGGCC
ATTATTTTAC CATTCGGACG GCAATTGGAT GGACTAATGC TGGGGGAAAC CACCGCGCTG
TCTTTGGGTA TAAAAGTCGG TCAGGTTCGG GCACTGGTCA TCATTGCGTG CGCCCTACTG
ACTGGGGCAG CGGTATCTAT GTCTGGGGTG ATTGGATTTA TTGGAATGAT GATTCCCAAT
TTACTCAGCC TATTGTTTGG CGGTGGTCGA ATGCGCATTA TGTTTTGGTC CGGCTGGTTT
GGGGCCTTGT TTTTATTGGT CATAGACAGT CTGGCGCGCC ATGTGGCCTA CCCCGTGGAT
GTGCCCATTG GCATCGTTTT GGCCTTAATC GGCGGCCCAT TTTTTATTTG GTTATTTATT
CGCAGCACCC GTAGCTGA
 
Protein sequence
MSNFVHPHKR FLSTTVISYG AAVLVSALLI WLSLGVGFGQ WSSPSQLDAT LWQLRYPRVV 
TALLVGLALS VSGAALQALF ENPLADPSLI GTSGGAALGV VLILALGISG IGVPLAAFIG
SLVVCLLVLG CHRFLGGGQM GLLILGFVIS AFCGALVSLI LFLSNDMVLR SATNWLAGSM
AEAGFVPLRY ALISIALGLA IILPFGRQLD GLMLGETTAL SLGIKVGQVR ALVIIACALL
TGAAVSMSGV IGFIGMMIPN LLSLLFGGGR MRIMFWSGWF GALFLLVIDS LARHVAYPVD
VPIGIVLALI GGPFFIWLFI RSTRS