| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1501 |
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| Symbol | |
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| ID | 5205268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1833308 |
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| End bp | 1834981 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599721 |
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| Product | cyclic peptide transporter |
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| Protein accession | YP_001280394 |
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| Protein GI | 148653301 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTA TCTCACCACC GCCCACCTCC TCCCTGTATA CGCTTATCTG GACTCAATAT
CGCTTGGGTT TTGTTAAAGT CATTGTCCTC AATCTTATAA ATGCAGCGGT CAGTGTGGGC
ATCATTGCTT ATATCAATCA CACCTTTTTA AGTGGTCAGA TTTTTGAGGC ATTATCTTGG
CAAAGCTTCG CTCAATTTTT GGCCATGGTA CTGCTGCTAC TGCTGACCTC TTTTGCGTCG
CAATACGCCC TAACCTGCTT GGGTCATCAG TTTGTTTATA AGCTGCGTAC TCAGCTGGTT
AAGCAAATTT TAGACACACC CGTGGCACAG GTAGATAACT TAGGCAGTGC CCGGCTCATG
GCCAGCTTAT CGACTGATAT CCAAGCCCTA ACCACAGCCT TTGTCAGAAT GCCGGAGCTG
GTACAGGGTA TTATTTTGGC AGTGGCTGTG TCTTTATATC TGGGCAGTCT GTCTTGGCCC
TTATTGCTGA TTATTATGCT GTGGATTGCT TTGACCATAT GGATAAGCAC TTTATTGGTA
AAACATGTCT ACCAAAACCT CACCCACATT CGCGATATTA ATGACGCGCT TTATCAAGAT
TATCAGTCCG TTATTGAAGG GCGCAAGGAG CTGGCGCTCA ACCAGCAGCG CGCCAAGCAG
TTATATACGC AAGACCTTGT TGGCCATGCT AAGGCCTACA AAAAAACCAT TATCAAGGCC
GATACTTATC ATTTATCTGC CGTGAATTGG TCAAATATCA TGATGTTTGC AGCTATTGGG
GTTATCTTCG CTGTGGCCAG CTACCTTGGT TTATCGCTTG GGGTGGCCAC TACCTTTGCA
TTGACCTTGC TGTTTATGCA GTCGCCGATT CTGCATGCGG TCGGCGCCTA CCCCACCCTA
CAGACGGCGC AAGTGGCGCT TGATAAAATC CAATCTTTAC AACTGGCTGA ATATCAGCCT
GAATTTATCA GCCCCACAGC CAATAAAGCT TGGCAAAGCC TAACCCTGCG CAATATAGAT
TATCAGTACT CAAGCCAAGA TTTGATTTTA AAGCAGGTAA ATTTGACCTT AAACAAAGGC
GATGTGGTGT TTTTGATAGG CTCAAACGGC AGTGGCAAAT CCACACTGGC CAAAGTACTT
ACGGGCATCT TCGCTCCGAC AAGTGGCGAG ATGACTCTTG ATGGCCGCTT AATCACCGAG
GCCAACCGTG CTCAATATCG CCAGCTTTTT TCAGCCATCT TTAGTGATCA GCATATCTTC
AAACAGCTGA TTGGCAAAGA CGGCAACGCC GTAGACATGG ACTTGGTACA GCACTGGCAG
CACCGCTTGC AACTACAAAA CAAAGTCAGT ATCGATGGCG ATAAGCTCTC AACAGATAAG
CTGTCGCAAG GCCAGCGTAA GCGTCTGGCC ATGCTAACCA CCGTGGCTGA ACAAAAAGAC
ATTTTGCTAC TCGATGAGTG GGCCGCCGAT CAAGACCCAG CCTTTCGCCG AGTGTTTTAT
CAACACTTAA TTCCTGAGCT AAAAGCTTTG GGTAAAACGT TATTTATTAT CAGTCATGAC
GACAGCTACT TTGAGCATGC CGACCGCCTA CTACTTATGA AACAAGGCAA GCTTGTGGAG
CTTGACCCAG AACAAAGAAA GCAGGCCAGC ACCGATGCCA TCTCTATGTT GTAA
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| Protein sequence | MSAISPPPTS SLYTLIWTQY RLGFVKVIVL NLINAAVSVG IIAYINHTFL SGQIFEALSW
QSFAQFLAMV LLLLLTSFAS QYALTCLGHQ FVYKLRTQLV KQILDTPVAQ VDNLGSARLM
ASLSTDIQAL TTAFVRMPEL VQGIILAVAV SLYLGSLSWP LLLIIMLWIA LTIWISTLLV
KHVYQNLTHI RDINDALYQD YQSVIEGRKE LALNQQRAKQ LYTQDLVGHA KAYKKTIIKA
DTYHLSAVNW SNIMMFAAIG VIFAVASYLG LSLGVATTFA LTLLFMQSPI LHAVGAYPTL
QTAQVALDKI QSLQLAEYQP EFISPTANKA WQSLTLRNID YQYSSQDLIL KQVNLTLNKG
DVVFLIGSNG SGKSTLAKVL TGIFAPTSGE MTLDGRLITE ANRAQYRQLF SAIFSDQHIF
KQLIGKDGNA VDMDLVQHWQ HRLQLQNKVS IDGDKLSTDK LSQGQRKRLA MLTTVAEQKD
ILLLDEWAAD QDPAFRRVFY QHLIPELKAL GKTLFIISHD DSYFEHADRL LLMKQGKLVE
LDPEQRKQAS TDAISML
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