Gene PsycPRwf_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1488 
Symbol 
ID5205517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1819783 
End bp1820331 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content47% 
IMG OID640599707 
Productisochorismatase hydrolase 
Protein accessionYP_001280382 
Protein GI148653289 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.151105 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAC AAGCCCTTAT CGTTGTAGAT ATCCAAAATG AGTATTTTGA GCAAGGTAAA 
CTGCCGCTGG TAGGTATCAA TGCTGCTGCA GATAAAGCAG CTTTGGTGAT TGAGTCTGCC
AGACAAAAAG GTCATACCGT TATCCATGTT CGTCATGAGA TGCCCTCGGC CGATGCGCCG
ATTTTTACAC CTGGCACTGA GGGTGTGGCC ATTAATGACA AGGTAAAGCC TATAGATGGC
GAGACGGTTA TTGTGAAGCA TTACCCCAAC TCTTTTCGTG AGACCTCTCT TAAGACTTTG
CTAGATGAAG CGGGTATAAC GCAGGTAACG GTGATTGGTG CGATGAGTCA TATGTGTATT
GACGCCACGG TCCGCGCCGC CGTAGATTTT GGTTATACCA CCACCACAAT TCATGATGCC
TGCGCCACCC TTGATCTTGA GTTTAAGGGT ACCAAAGTTC CAGCAGCTCA GGCGCATGCC
ACCATTATGG CTGCTATTGA ATTTTTGTAT GGTGAAGTGA TTGATGCCCA AACCTGGATT
GAGCGTTAA
 
Protein sequence
MNPQALIVVD IQNEYFEQGK LPLVGINAAA DKAALVIESA RQKGHTVIHV RHEMPSADAP 
IFTPGTEGVA INDKVKPIDG ETVIVKHYPN SFRETSLKTL LDEAGITQVT VIGAMSHMCI
DATVRAAVDF GYTTTTIHDA CATLDLEFKG TKVPAAQAHA TIMAAIEFLY GEVIDAQTWI
ER