Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1488 |
Symbol | |
ID | 5205517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1819783 |
End bp | 1820331 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640599707 |
Product | isochorismatase hydrolase |
Protein accession | YP_001280382 |
Protein GI | 148653289 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.151105 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCAC AAGCCCTTAT CGTTGTAGAT ATCCAAAATG AGTATTTTGA GCAAGGTAAA CTGCCGCTGG TAGGTATCAA TGCTGCTGCA GATAAAGCAG CTTTGGTGAT TGAGTCTGCC AGACAAAAAG GTCATACCGT TATCCATGTT CGTCATGAGA TGCCCTCGGC CGATGCGCCG ATTTTTACAC CTGGCACTGA GGGTGTGGCC ATTAATGACA AGGTAAAGCC TATAGATGGC GAGACGGTTA TTGTGAAGCA TTACCCCAAC TCTTTTCGTG AGACCTCTCT TAAGACTTTG CTAGATGAAG CGGGTATAAC GCAGGTAACG GTGATTGGTG CGATGAGTCA TATGTGTATT GACGCCACGG TCCGCGCCGC CGTAGATTTT GGTTATACCA CCACCACAAT TCATGATGCC TGCGCCACCC TTGATCTTGA GTTTAAGGGT ACCAAAGTTC CAGCAGCTCA GGCGCATGCC ACCATTATGG CTGCTATTGA ATTTTTGTAT GGTGAAGTGA TTGATGCCCA AACCTGGATT GAGCGTTAA
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Protein sequence | MNPQALIVVD IQNEYFEQGK LPLVGINAAA DKAALVIESA RQKGHTVIHV RHEMPSADAP IFTPGTEGVA INDKVKPIDG ETVIVKHYPN SFRETSLKTL LDEAGITQVT VIGAMSHMCI DATVRAAVDF GYTTTTIHDA CATLDLEFKG TKVPAAQAHA TIMAAIEFLY GEVIDAQTWI ER
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