Gene PsycPRwf_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1480 
Symbol 
ID5205221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1809979 
End bp1810386 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content44% 
IMG OID640599699 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001280374 
Protein GI148653281 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.10456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACTA AGATGACAAT ACAACCCTCT AATAAACCCA AACGAAGAAC TTACAGCGCT 
GAGTTTAAAG CACTTTTAGT AAAAGAAGCG ACAGACTCAG GTCGATCAAT CGCCAGTATC
GCTCGAGAGC ATGGCATTAA CCAAAACCTT CTACATAACT GGAAACGTCA GTATCAGCGT
ACACAGACTC AAACTGACAC ATTACCTGGC GCTATAAACA GTTCTCATGA TCCAAACCCG
CACTTTATTC CAATTCATCT TGAGCCTGAA GGTGCGCATC TAGGCTCAGC ATCCGTCATA
CAAAACATCA AACTGCAAAT CACAGCTCGA GCATCTGGGG ATATAAGCCT CAACATTGCC
CAAATTGACA CCCAAAGCTT GATTGACCTA CTACGAGGGC TACAATGA
 
Protein sequence
MDTKMTIQPS NKPKRRTYSA EFKALLVKEA TDSGRSIASI AREHGINQNL LHNWKRQYQR 
TQTQTDTLPG AINSSHDPNP HFIPIHLEPE GAHLGSASVI QNIKLQITAR ASGDISLNIA
QIDTQSLIDL LRGLQ