| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1468 |
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| Symbol | |
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| ID | 5205675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1800001 |
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| End bp | 1801476 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640599687 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001280362 |
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| Protein GI | 148653269 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.986472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.151461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACCG CTGCAAATGC ACAAAACCAA AAAATGATAA AACCCATCCC AATATTGATT
TCCTTTTTGA TTGCTGGATT TATTGGCCTC TTTAGTGAAA CCGCATTAAA TATGGCACTT
GGCAATTTGA TGCAGGAGTT CAACGTAGTC TCCTCAACTG TTCAGTGGAT TACCACAGGC
TACTTGCTGA CCATGGGCAT CCTTATTCCG GTTACCGCCC TACTCATACA ATGGTTAACA
ACACGGCAAT TATTCATCTC ATCCGTATTG TTCTCAATCG CTGGTGTCGT TCTGTCAGGA
TTGGCGTCAA CATTCAATGT GTTATTGCTG GGCCGTGTGA TTCAAGCCAT CGGCACAGGC
TTATTGATTC CTTTAATGTT CCATACCGTG CTCATCATTT TCCCCGTTCA TAAACGAGGG
GTTATCATGG GCGTGGTGGG TTTGGTGATG ATGTCAGCGC CCGCTGTCGG GCCTGCAACC
TCAGGGCTCA TCATTGAAGC ATTGAGCTGG AACTGGATTT TGTGGTTAAT CCTGCCATTT
CTTCTATTTA CCTTGGTTTA TGGGTTTATT TTCGTCCAGA ACGTTTCGAC CCTAACCAAA
CCAAAAGTTG ATGTGCTTTC TATCTTTTTA TCGACCATTG GTTTTGGCGG AATTGTCTAT
GGATTTAGTG TTGCAGGCCA CCAAGGTTGG GGCAGCCCGA TTGTCATAAG CTCTCTAGCT
ATCGGTTTGG CATCATTGAT TGTCTTTTCA ATCAGACAGT TCAAAATCGA CAACCCAATG
CTTGATTTAC GCACTCTAAA ATACCCCATG TTCACTTTAG GTTTATTGAG CGTTTCGGCA
ACCTTCATGA TTATTTTATC AACCATGATT TTGCTGCCTT TATATCTACA GATTGGTCTG
GGTCTGACTG CACTAACAGC AGGTCTTATC TTAATGCCAG GTGGCGCCCT AAACGGTATT
TTATCGCCTG TTGCCGGTCG TGTTTATGAT AAGTATGGGC CTAAATACCT ACTGACACCC
GGTTTTATCA TCATGCTATT CATGCTTTGG AACCTATCAA ACATGACTAT TGATACTTCA
AAAGAAATGG TGATTTTATT GCACTCAGGC TTGATGATTG GCGTGACCTT CGTCATGATG
CCACTGCAAA CCCATGGCCT AAATGCCCTA CCTGCCAAGC TGTACCCAGA TGGCACTGCA
CTGATTAACA CCTTGCTGCA AGTATCAGGC TCTATTGGCA CAGCATTGGC AATCACCATC
ATGTCGGCGG CTCAAAACAC CTACTTGCAG GATTTTCCAA ACCCATCGGA TCCCGCGCTC
GTCGGAGCTT CACTAACCGC AGGGGTGCAA ACGGCCTTTA TTTTAGGCAT TGTGCTGGCA
ATTAGTGGGT TGATTATGTC GCTGTTTATG AACAAGCCGA CACAGCAAGA ACTGATGTAT
GCTGAAAAAA CCGTAGACAG AAACTTGGTA AACTAA
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| Protein sequence | MSTAANAQNQ KMIKPIPILI SFLIAGFIGL FSETALNMAL GNLMQEFNVV SSTVQWITTG
YLLTMGILIP VTALLIQWLT TRQLFISSVL FSIAGVVLSG LASTFNVLLL GRVIQAIGTG
LLIPLMFHTV LIIFPVHKRG VIMGVVGLVM MSAPAVGPAT SGLIIEALSW NWILWLILPF
LLFTLVYGFI FVQNVSTLTK PKVDVLSIFL STIGFGGIVY GFSVAGHQGW GSPIVISSLA
IGLASLIVFS IRQFKIDNPM LDLRTLKYPM FTLGLLSVSA TFMIILSTMI LLPLYLQIGL
GLTALTAGLI LMPGGALNGI LSPVAGRVYD KYGPKYLLTP GFIIMLFMLW NLSNMTIDTS
KEMVILLHSG LMIGVTFVMM PLQTHGLNAL PAKLYPDGTA LINTLLQVSG SIGTALAITI
MSAAQNTYLQ DFPNPSDPAL VGASLTAGVQ TAFILGIVLA ISGLIMSLFM NKPTQQELMY
AEKTVDRNLV N
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