Gene PsycPRwf_1467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1467 
Symbol 
ID5205674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1799366 
End bp1799944 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content50% 
IMG OID640599686 
ProductTetR family transcriptional regulator 
Protein accessionYP_001280361 
Protein GI148653268 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.861342 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.113855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAA AACCTAAGGC AAAAGACGTA TTAATTGACA CCGCCTCTCA CCTATTTATG 
GTGCGTGGTT ATTGCGGTGT CGGTCTGAAC GACATCATCG ATGAGAGCGG CATACCCAAA
GGCTCATTGT ACTACTACTT TCCAGAGGGC AAAGAGCAGT TGGCCATTGC TGCCATCGAG
CACACCAAAC AACTGGTTCT AGAAGACATC ACGCGAGTCT TCTCGGAAAA CTCGAATCTA
ATCGAGGCCT TGCAAGCTTA TGTGTTTGCG CTGGCTCAAA TGTTCGGTGA AGGCGGCAAA
CCAATTGGCT CTCCAATTGG CACCATTGCC GGCGAGAAAC ATTCCACCAG TGAGCCCATT
CGCTTGGCCT GTGAGTCAAC CTTCAAAGGT TGGCAGGCTG TGTATGCTGA GAAGTTCGTG
GCTTCAGGCT ACTCCCAAGA GCAAGCTGAC AGTTTGGCTA CCGTTTTCCA CGCCCTAACC
GAGGGCGGCA TTTTATTGGC TTTCACCACC AAAAACGGCA AGCCTTTGGA AGCCATAGCT
GAACAGATTC CATCGCTTTT TTCTGAAAAA CCGGTGTGA
 
Protein sequence
MAKKPKAKDV LIDTASHLFM VRGYCGVGLN DIIDESGIPK GSLYYYFPEG KEQLAIAAIE 
HTKQLVLEDI TRVFSENSNL IEALQAYVFA LAQMFGEGGK PIGSPIGTIA GEKHSTSEPI
RLACESTFKG WQAVYAEKFV ASGYSQEQAD SLATVFHALT EGGILLAFTT KNGKPLEAIA
EQIPSLFSEK PV