Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1466 |
Symbol | |
ID | 5205837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1797903 |
End bp | 1798823 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640599685 |
Product | hypothetical protein |
Protein accession | YP_001280360 |
Protein GI | 148653267 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.254149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0688568 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGTT TTGTTGCGCG TCATAGCACC ATAATTATGC CGCTGTGCGC TGTTGTAGGT TTTGTTTTCC CAAGCTTGTC TAACGCCGTA TTGGCGTATT TGCCCGAAGT CTTGTTCTTC TTGATGTTTT TTACGCTGCT GGGTATTGAT CAATACGCCT TGTTAAAGCG TATCGTGACA AGATATGTGT GGGTTTTTGC CGTCCTACAA AGTGCGGGCA TGAGCCTGGT CTTAGTGTCA ATCTGTTATG CACTTGGAAT ACGGGGTGAT TTGCTGTTGG CCATTGCAGG GCTTGGCGCG ACGGCGCCTT TGTTTGGGAG TGGGGCACTG GTCAATGCGG TGGGGTTTGA TGCACAACTG GCCATGGCAA AAACCATTGC CGCAACACTG GTTATGCCAT GCACGCTATT GGTCATTTTG TGGTTTTTGG GTGATAAAAA CGCCCATTTA GACATGGCGA CTTATATCAA ACGTTTGATT GTATACATTA TTATGCCTAT GGGACTTGCC GTGCTGGCGC GCCGTCTCAT TCCCGCTCCT GTTTTGTCGC GCTATTATCC CAAAATTGGT CAAATCAATA TTTTACTGGT CATTTTATTT CCATTGGGAC TCATGGCAGG GTTTCGGGGC ACTTTCGATA ATGACCCGTG GCAAGCGTTG TCGTTATTAG CACTTAGCTC AGTGTTGGCG TTGTTCTTCT ATTTCAGCGC TTATTTTGTC TATCGCCGGT TTGGTTATGA AAAAGCCATT GTTGCGGCAT TGGTGTGTGG CGGACGAAAT GTTTTGCTTG CTTATACCAT CACCGTTCCG TTTATGGGTG CCATGTTCCT GCCTTTACTG GGTGCTTTTC AACTGCCGGC TTTTTGTTTG CCACTGCTTG GCAAATATAT GGTTGAGTGG TATAGGAGAA ACGCGCATTA G
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Protein sequence | MLRFVARHST IIMPLCAVVG FVFPSLSNAV LAYLPEVLFF LMFFTLLGID QYALLKRIVT RYVWVFAVLQ SAGMSLVLVS ICYALGIRGD LLLAIAGLGA TAPLFGSGAL VNAVGFDAQL AMAKTIAATL VMPCTLLVIL WFLGDKNAHL DMATYIKRLI VYIIMPMGLA VLARRLIPAP VLSRYYPKIG QINILLVILF PLGLMAGFRG TFDNDPWQAL SLLALSSVLA LFFYFSAYFV YRRFGYEKAI VAALVCGGRN VLLAYTITVP FMGAMFLPLL GAFQLPAFCL PLLGKYMVEW YRRNAH
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