Gene PsycPRwf_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1466 
Symbol 
ID5205837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1797903 
End bp1798823 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content47% 
IMG OID640599685 
Producthypothetical protein 
Protein accessionYP_001280360 
Protein GI148653267 
COG category[R] General function prediction only 
COG ID[COG0385] Predicted Na+-dependent transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.254149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0688568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGTT TTGTTGCGCG TCATAGCACC ATAATTATGC CGCTGTGCGC TGTTGTAGGT 
TTTGTTTTCC CAAGCTTGTC TAACGCCGTA TTGGCGTATT TGCCCGAAGT CTTGTTCTTC
TTGATGTTTT TTACGCTGCT GGGTATTGAT CAATACGCCT TGTTAAAGCG TATCGTGACA
AGATATGTGT GGGTTTTTGC CGTCCTACAA AGTGCGGGCA TGAGCCTGGT CTTAGTGTCA
ATCTGTTATG CACTTGGAAT ACGGGGTGAT TTGCTGTTGG CCATTGCAGG GCTTGGCGCG
ACGGCGCCTT TGTTTGGGAG TGGGGCACTG GTCAATGCGG TGGGGTTTGA TGCACAACTG
GCCATGGCAA AAACCATTGC CGCAACACTG GTTATGCCAT GCACGCTATT GGTCATTTTG
TGGTTTTTGG GTGATAAAAA CGCCCATTTA GACATGGCGA CTTATATCAA ACGTTTGATT
GTATACATTA TTATGCCTAT GGGACTTGCC GTGCTGGCGC GCCGTCTCAT TCCCGCTCCT
GTTTTGTCGC GCTATTATCC CAAAATTGGT CAAATCAATA TTTTACTGGT CATTTTATTT
CCATTGGGAC TCATGGCAGG GTTTCGGGGC ACTTTCGATA ATGACCCGTG GCAAGCGTTG
TCGTTATTAG CACTTAGCTC AGTGTTGGCG TTGTTCTTCT ATTTCAGCGC TTATTTTGTC
TATCGCCGGT TTGGTTATGA AAAAGCCATT GTTGCGGCAT TGGTGTGTGG CGGACGAAAT
GTTTTGCTTG CTTATACCAT CACCGTTCCG TTTATGGGTG CCATGTTCCT GCCTTTACTG
GGTGCTTTTC AACTGCCGGC TTTTTGTTTG CCACTGCTTG GCAAATATAT GGTTGAGTGG
TATAGGAGAA ACGCGCATTA G
 
Protein sequence
MLRFVARHST IIMPLCAVVG FVFPSLSNAV LAYLPEVLFF LMFFTLLGID QYALLKRIVT 
RYVWVFAVLQ SAGMSLVLVS ICYALGIRGD LLLAIAGLGA TAPLFGSGAL VNAVGFDAQL
AMAKTIAATL VMPCTLLVIL WFLGDKNAHL DMATYIKRLI VYIIMPMGLA VLARRLIPAP
VLSRYYPKIG QINILLVILF PLGLMAGFRG TFDNDPWQAL SLLALSSVLA LFFYFSAYFV
YRRFGYEKAI VAALVCGGRN VLLAYTITVP FMGAMFLPLL GAFQLPAFCL PLLGKYMVEW
YRRNAH