| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1460 |
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| Symbol | |
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| ID | 5205668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1790372 |
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| End bp | 1791592 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599678 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001280355 |
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| Protein GI | 148653262 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000184995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0669492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGA TAAAAGACAG CTATGGTTTA CACGCATCGA CACTACCAGA CACCCAAGGC
CTATATGGCG AGTTTGGGGG AAAAATTAGT CATCCTGAAC TGGCACGAGC GCTAGATGAG
CTAGAGACTG GATTTCGTGA AATTATTAAA AATGATGACT TTATCGCCGA GATGAAGCGC
CTGCGTGAGA CCTATGTAGG CAGACCTAGC CCGATTTATC ATGCTAAGCG ACTGACAGCG
CACTGCGGCG GGGCGCAAAT TTATCTAAAG CGTGAGGACT TAAACCATAC CGGCGCCCAC
AAAATCAACC ACTGCTTAGG TGAGGTGCTA CTGGCCAAAA AACTGGGAAA AACCAAGGTA
ATCGCTGAGA CCGGTGCAGG CCAGCATGGG GTAGCATTGG CGACGGCGGC AGCACTTATG
GGCGTGGCCT GCGAGATTCA TATGGGGGTG GTCGATATCA AAAAAGAGCA TCCTAATGTC
AGCCGTATGA AAATCTTGGG CGCCAATCTG GTGCCCGTAT CACAAGGCGC TGGTACCTTA
AAAGAGGCGG TTGATAGTGC TTTTGAGGCG TATTTGGGTG ATATTAAAAA CAGTATGTTT
GCCATTGGCT CAGTGGTTGG TCCCGCGCCT TATCCTGAGA TGGTCGGGTA CTTTCAATCG
GTTATTGGCC ATGAAGCGCG CGAGCAGTTC TTACAGGCGA CTGGTAGTTT ACCTAATAAA
GTCGTGGCTT GTGTCGGTGG CGGCTCCAAC GCCATGGGTC TATTCAGCGG CTTTATGGAA
GATGATGTCG TTGAGAAGAT TGGTGTTGAG CCGGCAGGCG AGGGGTTAGA TACGCCGAAT
CATGCGGCCA CCATGACTAA AGGTGTCAAA GGTGAGATAC AAGGCTTTAA GTGTTATGTG
CTACTTAATG ACAAAGGCGA GCCGGCACAA GTGCATTCTA TCGCTTCAGG GCTAGACTAT
CCGGGCGTTG GTCCTCAGCA CTCTTATTTG CGCGATGCCA ATTTGGCCAC TTATGAAGCA
ATCACAGATA AAGAATGTTT AGAGGCGTTC ATGGCCCTGT CTCGCCTGGA GGGTATTATC
CCAGCACTGG AGTCCTCACA TGCGGTGGCT TATGCAATGA AGATTGCCAA AGACATGCCG
GCTGATCAGA GCATCTTGGT CAACTTGTCC GGTCGAGGTG ATAAAGACAT TGACTTTGTA
TTACAGAAAA TTAAGGTATA G
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| Protein sequence | MTQIKDSYGL HASTLPDTQG LYGEFGGKIS HPELARALDE LETGFREIIK NDDFIAEMKR
LRETYVGRPS PIYHAKRLTA HCGGAQIYLK REDLNHTGAH KINHCLGEVL LAKKLGKTKV
IAETGAGQHG VALATAAALM GVACEIHMGV VDIKKEHPNV SRMKILGANL VPVSQGAGTL
KEAVDSAFEA YLGDIKNSMF AIGSVVGPAP YPEMVGYFQS VIGHEAREQF LQATGSLPNK
VVACVGGGSN AMGLFSGFME DDVVEKIGVE PAGEGLDTPN HAATMTKGVK GEIQGFKCYV
LLNDKGEPAQ VHSIASGLDY PGVGPQHSYL RDANLATYEA ITDKECLEAF MALSRLEGII
PALESSHAVA YAMKIAKDMP ADQSILVNLS GRGDKDIDFV LQKIKV
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