| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1458 |
|---|
| Symbol | |
|---|
| ID | 5206736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1788307 |
|---|
| End bp | 1789452 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640599676 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
|---|
| Protein accession | YP_001280353 |
|---|
| Protein GI | 148653260 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
|---|
| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0327154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.102328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT ATATTACAGG GACAGGTCTA TATATTCCGC CATATAGCAT CAGTAATGAA
GAGCTTGTTG ACTCATTTAA CCAGTATGTC GCTAATTATA ATACTCAATA CGCCAGCGAA
ATTGAAGCAG GGACCCGTGA CGCACTAGAG CCTTCATCGG CTGAGTTCAT TGAAAAAGTA
TCGGGTATTA AGTCGCGATA TGTTATGGAC AAAAAAGGCA TTTTAGACCC TGAAATTATG
GCACCTGTAT TGCCGGCTCG TAAGCTGGGT GAAGAGCTGT CTTTAATGGC TGAGATGGGG
GTGGATGCCC TACAACAAGC TTTAGCAGAA GCCGGCCTTG AGGCCACTGA GCTTGACGGA
ATTATTGTGG CCTGTTCAAA CTTACCCCGC GCTTATCCTG CATTGGCCAT TGAGATTCAA
CATGCCATCG GTATGGTGGG CGGCTTCGCT TATGACATGA ACGTGGCTTG TAGCGCCGCA
ACCTTTGGTA TCGCTCAAGC AGTGGGTACG ATTAAAGGCG GCTTAGGCAC TAAAATTGCT
GTGGTAAACG TTGAGATTAC TACCTCGCAC CTAAACTTCC GTAACCGTGA TAGCCACTTT
ATCTTTGGTG ATGTGGCGAC GGCCTCTATT ATTGAGCAGC TAGATACACC AAAAGGCTAT
GAGATTTTAG ACAGCAAACT GTTTACTCAG TTCTCAATCA ATATCAAAAA TGAATACAGC
TTCTTAGACA GATGCGAGTA TTTAGCAGCA GGTACTGAGC TGTATCATGA TCTAAAAGAA
CCGGTAACGG ATAAGCTGTT TTTACAAAAT GGCCGTAAGG TGTTTCGCGA AGTATGTCCT
AAAGTCTCTG AGATGATCAG TGAGCATTTG CAAGAGAACA ACTTTAAGCC TGAAGAAGTA
AAAATGATGT GGCTACACCA AGCCAACTTA AACATGATCA ATCTAATTTT ACGCAGTGTG
GTCGGCAAAG ATGCTGACCC TGCGCTTGCG CCCACTGTGA TTGATGAATT TGGTAACACC
AGTTCAGCCA GCCCCGTGAT TGTATTCCAT CGCTTTAAAG ATCAGCTGCA ATCAGGCGAT
TTGGGCGTCA TGTGCTCCTT TGGTGCCGGT TACTCAATCG GCTCAGTGCT GGTGCGCAAA
GTTTAA
|
|---|
| Protein sequence | MKTYITGTGL YIPPYSISNE ELVDSFNQYV ANYNTQYASE IEAGTRDALE PSSAEFIEKV
SGIKSRYVMD KKGILDPEIM APVLPARKLG EELSLMAEMG VDALQQALAE AGLEATELDG
IIVACSNLPR AYPALAIEIQ HAIGMVGGFA YDMNVACSAA TFGIAQAVGT IKGGLGTKIA
VVNVEITTSH LNFRNRDSHF IFGDVATASI IEQLDTPKGY EILDSKLFTQ FSINIKNEYS
FLDRCEYLAA GTELYHDLKE PVTDKLFLQN GRKVFREVCP KVSEMISEHL QENNFKPEEV
KMMWLHQANL NMINLILRSV VGKDADPALA PTVIDEFGNT SSASPVIVFH RFKDQLQSGD
LGVMCSFGAG YSIGSVLVRK V
|
|---|
| |