| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1456 |
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| Symbol | lysS |
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| ID | 5206734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1785232 |
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| End bp | 1786764 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640599674 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001280351 |
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| Protein GI | 148653258 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.370095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.105516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACC AATCAACGAA CGATCAAGAT CAAATTCCAT CAGCAGAAGA TACCAATGAC
CTGATTGCTC AGCGCCAAGC CAAACTTGAC GAGATCAGCG CTGCTGGCAA AATCGCTTAT
CCGAATCAGT TCAAGCGCAC TGATTATGCT GAGGATTTAC AAAAACAGTT CGAAGGCATT
ACAAAGCAAG AAATCGAAGA AAATGCCGCC AATGGCGGCA AAACTCAGGT GAGCATTGCC
GGTCGTGTGA TGCTAAACCG CGGCGCCTTT ATTGTTATTC AAGACATGAC AGGACGTATT
CAGCTGTATG TGGCGCGCAA AGAGCTCGAT GAAGACAGCC TAGCGTTAAT CAAATCCCTA
GATTTGGGTG ATATTATTGG TGTGAGCGGC TATATTGGCC GTTCGGGTAA AGGTGATTTA
TACGTTCATA TCGAACAAAT TACTTTATTA ACCAAGTCTT TACGCCCTAT GCCAAATAAG
TTCCATGGCC TAGCAGACAC AGAAGCACGC TATCGCAACC GTCATTTAGA CTTAATGACC
AACGAATCTA GCCGCAATAC GTTTATGATT CGTAGCCAAG TGATTAGTGG TATCCGTAAA
TTCATGCTCA ATGAGCGCTT TATGGAAGTT GAGACCCCAA TGATGCATCC CATTCCAGGG
GGTGCTGTGG CGCGTCCATT TATCACCCAT CACAATGCGT TAGATATGCC ATTATATTTA
CGTATTGCCC CTGAGCTGTA TCTAAAGCGT TTGGTCGTGG GCGGCTTTGA GCGGGTATTT
GAGATTAACC GTAGCTTCCG TAATGAAGGG GTATCTACCC GCCACAATCC TGAATTCACC
ATGATTGAGT TTTATCAAGC CTATGCCGAT TATAAGGACT TGATGGATTT AACTGAGCGT
TTATTTAACC AACTGGCGAT GGATATTTTA GGGACGACTG AGCTGACCTA TCAAGAAGAA
ACCATCAGTC TCAAAGCACC TTTTGCTCGT TTAAGCATGA CAGATGCCAT TGCTCAGTAT
GCCGAAGGCT TCGATATGTC TAAAGTAGCG GACAGAGATT ACCTAGCTGA CTATGCTCAA
AATGTATTAA AGCAGCAAGT CAAAGAAGGC TTCGGTATTG GTAAACTGCA AACCATTATC
TTTGAAGAGA CTGCTGAGCA TAAGCTGCGT CAGCCGACCT TCATTACCCA GTACCCTGCT
GAGACCTCAC CGCTTGCACG CCGCAACGAT GAGAATCCTG AGATTACTGA CCGCTTTGAG
TTGTTCATTG GCGGTCGTGA GATTGCCAAT GGCTTTAGTG AGTTAAATGA TCCAGCCGAC
CAAGCTGAAC GCTTCCACAA TCAAGTGGCC GAAAAAGACG CAGGTGATGA TGAAGCGATG
CATTTTGATG CAGACTATAT CGAAGCCTTA GCTTATGGTC TGCCACCGAC AGCGGGTGAG
GGTATTGGTA TCGACCGTTT GGTCATGCTA TTTACAGATG CAGCCAGCAT CCGTGATGTG
ATTTTATTCC CGCACATGCG CATCAAGCAC TAA
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| Protein sequence | MSNQSTNDQD QIPSAEDTND LIAQRQAKLD EISAAGKIAY PNQFKRTDYA EDLQKQFEGI
TKQEIEENAA NGGKTQVSIA GRVMLNRGAF IVIQDMTGRI QLYVARKELD EDSLALIKSL
DLGDIIGVSG YIGRSGKGDL YVHIEQITLL TKSLRPMPNK FHGLADTEAR YRNRHLDLMT
NESSRNTFMI RSQVISGIRK FMLNERFMEV ETPMMHPIPG GAVARPFITH HNALDMPLYL
RIAPELYLKR LVVGGFERVF EINRSFRNEG VSTRHNPEFT MIEFYQAYAD YKDLMDLTER
LFNQLAMDIL GTTELTYQEE TISLKAPFAR LSMTDAIAQY AEGFDMSKVA DRDYLADYAQ
NVLKQQVKEG FGIGKLQTII FEETAEHKLR QPTFITQYPA ETSPLARRND ENPEITDRFE
LFIGGREIAN GFSELNDPAD QAERFHNQVA EKDAGDDEAM HFDADYIEAL AYGLPPTAGE
GIGIDRLVML FTDAASIRDV ILFPHMRIKH
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