Gene PsycPRwf_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1444 
Symbol 
ID5206473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp1767941 
End bp1768897 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content43% 
IMG OID640599662 
ProductNMT1/THI5-like protein 
Protein accessionYP_001280339 
Protein GI148653246 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.477186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTA TGGCGCTAAG TTTAATGGCC TGCCAGCCAA AAGAGACATC TACAAAGGCA 
GCTTCAGACA CAACAGATGC GCTAACTCAA GTGGTTATCT CATTAGACTG GGTGCCCAAT
ACCAACCATA CGGGTCTGTA TGTGGCACAA GACAAGGGGT ATTTTAAAGA ACAAGGTCTT
GAGGTCCAAA TCGTACAACC GAGCGAAGAC AGTGCTTCAA CTTTGGTGGC CAATGACAGA
GCCGATTTTG GGATTTATTT TCAGCCCAAT ATGGTCAGTC GTTTGGAAAA AGGTGTACCC
ATTACCGCAG TAGCGGCAAT ACTACAGCAT AACCCAGCAG GTTTATTGTC TTTGAAGTCA
TTAGGTGCCA AATCTCCAAA GGACTTAAAT GGTAAACGCT ATTCTACTTG GGAAGACCCG
ATTGATGATG CCACCGTGTC GCATATTGTG GGTAACGATT TGGTAAAAAT TCCTGGTGAA
GCAACCGATG CCACTGTGGC ACTTCGTATG AATCAGTTTG ACTATATCTT GGCTTATTAT
GGCTGGGATG GGGTTCATGC CAAGTTAAAA GGTGTGGACA CTAACTTTTT CTTCTTAAGA
GATTATGAGC CTATCTTTGA TTATTATGCG CCTGTGGTAA TTACCAACAA TAAGCTACTT
AACAGCAATC CACAACTGGT TAAAAAGACG CTAGCGGCCA TGAAAAAAGG CTATATTTAT
GCGGCTAAAA ATCCAGAAGA GAGCGCCAAT ATCTTAATAA AATATGCGCC TGAGACTAAT
AAAGAGCTTG CGCTTGCCAG TCAAAAATAC ATCTCAAAAC AGTATCTAGA TGACGAGGGC
GACTGGGGTA AGTTTGATTA TGATCGCTGG GATAGGTTCT ATGACTGGGT GTATAAACAA
GGCCTTATTG ATAAGCCTCT GCCACCACAG GCAGGTGTCA GTAACGACTA TTTATAA
 
Protein sequence
MAIMALSLMA CQPKETSTKA ASDTTDALTQ VVISLDWVPN TNHTGLYVAQ DKGYFKEQGL 
EVQIVQPSED SASTLVANDR ADFGIYFQPN MVSRLEKGVP ITAVAAILQH NPAGLLSLKS
LGAKSPKDLN GKRYSTWEDP IDDATVSHIV GNDLVKIPGE ATDATVALRM NQFDYILAYY
GWDGVHAKLK GVDTNFFFLR DYEPIFDYYA PVVITNNKLL NSNPQLVKKT LAAMKKGYIY
AAKNPEESAN ILIKYAPETN KELALASQKY ISKQYLDDEG DWGKFDYDRW DRFYDWVYKQ
GLIDKPLPPQ AGVSNDYL