| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1439 |
|---|
| Symbol | |
|---|
| ID | 5206610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1763049 |
|---|
| End bp | 1764149 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640599657 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001280334 |
|---|
| Protein GI | 148653241 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0335022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTTG CAAGAGTAGA TCCGTTTTTT AGGCGATTAT TTATAGTCGT GGCAATGGTT
ATTGGTTTGG GATTATTGTA TTTGCTCATT CCGGTAATTG TGCCGTTTTT ATGTGCGTTT
ATTCTTGCTT ATTTGTTTAA CCCTGTCGTG ACACGTATGG CGCGCTTTAT GCCACGCTGG
CTGGCGATTA TTTTCGTGTA TACAGCGATT ATTGTGGGTT TTGGTGCGTT GTTATGGTGG
TTGCTGCCGA CTTTGTGGGA ACAGCTTCAG TCTGCTTGGG AGTATTTACC ACGTGTTGTG
GAGTGGTATA ACAGTGATAT TCGAGTGTGG GTGAATAACA ACAGTCAATT TCATTTGCCG
CCGTTAGAGA GTCATATTGT CTCTGAGACG GCGCTTGATT ACCTAAATAA GAACTATAAT
GTGGCGGATG CGCAGTCCTT TTTTATGCAG GTATTAAATT CAGGTCTGGC AGTGATTAAT
AGCACCGGTT TGGTGGTCTT AGTGCCTATT TTGACCTTTT ATTTCTTATT TAACTGGAAT
CAGCGCTTAC AGACTTGGAA AAAAGCCTTA CCAAAAGCCA GTGCCCCTAA AATTATTGAA
ATCGTGCATG ATTGTGATGA TGCGTTAATG GCCTTTATTA AGGGTCAACT GCTGGTTATG
ATTTTGCTGG GTGTGGTCTA TGCTGTACAG CTGCAGCTGA TAGGACTGGA TTTGGGTCTG
ATTATCGGTA TGGTGGCTGG TATCGCAAGC TTTGTGCCTT ATTTAGGTTT TGGGCTTGGC
TTTATCGCCG CTATTATCGC CGGCTTATTC CAGTTTGGGA TGGATTGGGT GCATCTTGGC
CTAATTGCGG GCGCCTTTAT GGTGGGGCAA GCGGTAGAGG GTTATGTATT ACAGCCGCTG
CTGTTGGGTG ATAAAATTGG CCTGTCACCG CTTTGGGTGA TTTTTGCGGT ATTGGCAGGT
GCAAGTTTAA TGGGCTTTGT GGGTATGCTG ATTGCATTGC CAGTCTCTGC CATCTTAAAT
GTGTTATTCC ATCATGGTTA TGAGGCGTAT AAACAGACTG ATTTTTACAA AGGTCGTAAA
CAGTATAAGC TGTTTAAATA A
|
|---|
| Protein sequence | MQVARVDPFF RRLFIVVAMV IGLGLLYLLI PVIVPFLCAF ILAYLFNPVV TRMARFMPRW
LAIIFVYTAI IVGFGALLWW LLPTLWEQLQ SAWEYLPRVV EWYNSDIRVW VNNNSQFHLP
PLESHIVSET ALDYLNKNYN VADAQSFFMQ VLNSGLAVIN STGLVVLVPI LTFYFLFNWN
QRLQTWKKAL PKASAPKIIE IVHDCDDALM AFIKGQLLVM ILLGVVYAVQ LQLIGLDLGL
IIGMVAGIAS FVPYLGFGLG FIAAIIAGLF QFGMDWVHLG LIAGAFMVGQ AVEGYVLQPL
LLGDKIGLSP LWVIFAVLAG ASLMGFVGML IALPVSAILN VLFHHGYEAY KQTDFYKGRK
QYKLFK
|
|---|
| |